Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E08
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   0.83 
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   2.5  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   5.9  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    22   7.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 298 RPFQSLVAL--AMSSPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFG 149
           RPF S+  L   +S+P  LG RP+G  LG      P+  P H    + +  G
Sbjct: 548 RPFFSIPGLPPGLSAPLGLGMRPQGGPLG-----LPSHHPLHPSLGLSMGLG 594


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 293 GSQDHCAADSSKQTSPDSCCSPLQQPL 373
           GS D   A+ S+Q      C+P  +PL
Sbjct: 274 GSSDDALAEESEQVVVRRSCTPWMRPL 300


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 246 PKKVGDDIAXATSDWKGLKIT 308
           PKK+ D++A    D  G+K+T
Sbjct: 387 PKKLDDEVAALHLDKLGVKLT 407


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -3

Query: 412 TVQGGGSLRGSDDKGLLQRGTTAIWACLF*TVSCT 308
           T  GGG+   S     ++R    +  C F  +  T
Sbjct: 64  TNAGGGNFSSSSSSSTIERDRACLMQCFFEEMKAT 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,052
Number of Sequences: 2352
Number of extensions: 7667
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)