Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E07
(430 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 177 1e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 159 2e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 155 5e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 148 6e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 144 9e-34
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 124 6e-28
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 124 8e-28
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 117 9e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 116 3e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 113 1e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 111 4e-24
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 111 8e-24
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 109 3e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 100 1e-20
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 100 3e-20
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 97 1e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 76 3e-13
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 2e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 58 8e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 3e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 53 2e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 52 5e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 2e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 34 1.1
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 33 1.9
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 3.3
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 177 bits (430), Expect = 1e-43
Identities = 83/109 (76%), Positives = 91/109 (83%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRP 382
+ LPKLYAKLHYCVSCAIHSKVVRNRS + R RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 159 bits (387), Expect = 2e-38
Identities = 73/98 (74%), Positives = 81/98 (82%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPP 349
+ LPKLY KLHYCVSCAIHSKVVRNRS + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 155 bits (375), Expect = 5e-37
Identities = 70/113 (61%), Positives = 83/113 (73%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRPQAVQ 394
+ LPKLYAK YCVSCAIHS VVR RS +R +RTPP R P+ Q
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 148 bits (358), Expect = 6e-35
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPK 352
+ LPK Y KLHYCVSCAIH+++VR RS +DR R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 144 bits (348), Expect = 9e-34
Identities = 68/113 (60%), Positives = 83/113 (73%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRPQAVQ 394
++LPK Y KL YCVSC IH +VVR RS DR R PPK + ++ QAV+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 124 bits (300), Expect = 6e-28
Identities = 63/115 (54%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Frame = +2
Query: 71 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 250
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 251 K--LYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRPQAVQRK*FI 409
K LY KL+YCV CAIH KVVRN K +T P P + PQ + F+
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQPPPKPMFL 115
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 124 bits (299), Expect = 8e-28
Identities = 56/72 (77%), Positives = 63/72 (87%)
Frame = +2
Query: 185 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFP 364
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRS KDR IRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 365 RDMSRPQAVQRK 400
RDM+RPQ VQRK
Sbjct: 71 RDMARPQNVQRK 82
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 117 bits (282), Expect = 9e-26
Identities = 51/97 (52%), Positives = 68/97 (70%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTP 346
++LPK Y K +YCVSCA+H VVR R+ R R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 116 bits (278), Expect = 3e-25
Identities = 59/113 (52%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 236 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRPQA 388
F +PK+Y KL YCVSCAIH+++VR RS +DR R K R RP+A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 113 bits (273), Expect = 1e-24
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 236 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSN 358
+ +PKLY KL YC+SCAIHS+VVR R +DR IR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 111 bits (268), Expect = 4e-24
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 232
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 111 bits (266), Expect = 8e-24
Identities = 54/87 (62%), Positives = 65/87 (74%)
Frame = +2
Query: 86 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 265
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 266 LHYCVSCAIHSKVVRNRSXKDRXIRTP 346
LHYCVSCAIHS+VVRN K R P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 109 bits (261), Expect = 3e-23
Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Frame = +2
Query: 56 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 226
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 227 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNF 361
VY F +PKLY K +C++CAIHS+ VR R +R IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 100 bits (240), Expect = 1e-20
Identities = 44/95 (46%), Positives = 66/95 (69%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIR 340
+ +PKLY K + + AIH+++VR RS DR R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 99.5 bits (237), Expect = 3e-20
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = +2
Query: 107 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 286
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 287 AIHSKVVRNRSXKDRXIRTPPK 352
AIHSKVVR RS + R IR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 97.5 bits (232), Expect = 1e-19
Identities = 41/91 (45%), Positives = 62/91 (68%)
Frame = +2
Query: 68 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 247
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 248 PKLYAKLHYCVSCAIHSKVVRNRSXKDRXIR 340
P++ K +CVSCA H+K+VR RS + R IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 76.2 bits (179), Expect = 3e-13
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXI 337
++ PKLY+ + Y +S A K ++ K R I
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +2
Query: 98 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 268
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 58.0 bits (134), Expect = 8e-08
Identities = 31/108 (28%), Positives = 53/108 (49%)
Frame = +2
Query: 62 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 241
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 242 QLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTPPKSNFPRDMSRPQ 385
+P+ Y YCV+CAI+ +++ RS +R + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 56.0 bits (129), Expect = 3e-07
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +2
Query: 62 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 232
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 233 PMFQLPKLYAKLHYCVSCAIHSKV 304
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 53.2 bits (122), Expect = 2e-06
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 232
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 233 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDR 331
+ + K YCVSCA+H +V+ R + R
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQR 88
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.0 bits (119), Expect = 5e-06
Identities = 25/97 (25%), Positives = 48/97 (49%)
Frame = +2
Query: 56 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 235
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 236 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRXIRTP 346
+ + YC++CA+ +++ RS ++R + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 46.8 bits (106), Expect = 2e-04
Identities = 33/106 (31%), Positives = 49/106 (46%)
Frame = -1
Query: 355 TLGRSTDXSVFXRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 176
+L RS+D SV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 175 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSHVXNLQS 38
D LVLW+ V S +VT+++L ++ ++L H + S
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWHSVKVYS 135
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 34.3 bits (75), Expect = 1.1
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +2
Query: 53 NMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 232
N RK R+G + RG V C C VP+ KAI I + + ++D V+
Sbjct: 4 NPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYVH 63
Query: 233 PMFQLPKLYAKLHYCVSCA 289
+ K++YC CA
Sbjct: 64 TFSR------KVYYCPKCA 76
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.5 bits (73), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 110 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 289
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 290 IHSKVVRNR 316
H + +R
Sbjct: 63 RHRGIKDHR 71
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 3.3
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 119 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 265
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,454,588
Number of Sequences: 1657284
Number of extensions: 6598250
Number of successful extensions: 15281
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15269
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -