Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E04
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    25   2.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.6  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   8.8  

>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 472 TVTELDLFPSXPTGHIR--SDRYVFVF 546
           +VT+L + P  PT H R  S+R+V +F
Sbjct: 465 SVTDLTISPILPTNHARTVSNRFVRLF 491


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 527 SERMWPVGXEGNRSSSVTVVLVAH 456
           SERM P G  GN S++    + +H
Sbjct: 808 SERMLPSGATGNNSTNSAYSMQSH 831


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 506 GXEGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGV 384
           G    RSSS   ++  HS        +  GV G +   AGV
Sbjct: 679 GGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTGAGV 719


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 378 NRWG*HPSKYGQQFR 334
           N W  HP KYGQ  R
Sbjct: 5   NLWYSHPRKYGQGSR 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,598
Number of Sequences: 2352
Number of extensions: 10698
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)