Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E03
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.9  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 394 ADSDTWEPEQTLSCPE 441
           ADS TW P + L+ P+
Sbjct: 343 ADSVTWNPHKLLTAPQ 358


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 431 LVLN*SENLMXKRRILKIRNENLV 502
           L LN S  ++ + +ILK+  +NLV
Sbjct: 383 LPLNISREMLQQNKILKVIRKNLV 406


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 605 EVERILQVHHKK 640
           E+ER++Q+ HKK
Sbjct: 193 EIERMVQIIHKK 204


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 324 DLIXXFNDTFVFCRFIFL 271
           D +      FVFC FI+L
Sbjct: 136 DYVSLLQLVFVFCYFIYL 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,577
Number of Sequences: 336
Number of extensions: 1758
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)