Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E03
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 45 5e-05
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 43 2e-04
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 43 2e-04
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 40 0.002
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 38 0.008
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 37 0.011
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 29 2.2
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 5.0
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 28 5.0
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 5.0
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 28 6.7
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 27 8.8
U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g... 27 8.8
U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g... 27 8.8
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 27 8.8
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 27 8.8
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 27 8.8
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 27 8.8
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 27 8.8
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 27 8.8
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 27 8.8
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 316 YEVXKILDSXKIKGKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
Y V IL+ K KGK + I+W GY ++WEP++ + P LI F
Sbjct: 8 YTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAF 54
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 316 YEVXKILDSXKIK-GKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+LD K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 316 YEVXKILDSXKIK-GKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+LD K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 316 YEVXKILDSXKIK-GKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+LD K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 316 YEVXKILDSXKIK-GKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+LD K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 316 YEVXKILDSXKIK-GKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+LD K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +1
Query: 316 YEVXKILDSXKIKGKLHYLIRWKGYSADSDTWEPEQTL 429
+EV KIL L +RW GY AD DTWEPE+ L
Sbjct: 24 FEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 316 YEVXKILDSXKIKGKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+L+ +G Y I+W+G+ +WEP + L C +I ++
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 316 YEVXKILDSXKIKGKLHYLIRWKGYSADSDTWEPEQTLSCPELIGKF 456
+ V K+L+ +G Y I+W+G+ +WEP + L C +I ++
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 316 YEVXKILDSXKIKGKLHYLIRWKGYSA---DSDTWEPEQTLSCPELIGKF 456
Y V ++L K+KG YL++WKGY +S+ WE E +C +L+ +
Sbjct: 87 YAVERVLAHRKVKGSPLYLVQWKGYPHPVWNSEMWE-EDLDNCKDLLAAY 135
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 358 KLHYLIRWKGYSADSDTWEPEQTL-SCPEL 444
K YL+ W+GY TWEPE+ L +C EL
Sbjct: 48 KYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 367 YLIRWKGYSADSDTWEPEQTL 429
+L++W GY TWEPE +
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI 115
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 352 KGKLHYLIRWKGYSADSDTWEPEQT 426
K + YL++WK S D TWE + +
Sbjct: 502 KSQQDYLVKWKELSYDQATWERDDS 526
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 100 DDDVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDDF 219
D+D T +D T T NKT V DE D + DDF
Sbjct: 27 DNDELPETEPESDSDKPTVTSNKTENQVADEDYD-SFDDF 65
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 352 KGKLHYLIRWKGYSADSDTWEPEQT 426
K + YL++WK S D TWE + +
Sbjct: 502 KSQQDYLVKWKELSYDQATWERDDS 526
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 352 KGKLHYLIRWKGYSADSDTWEPEQT 426
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 352 KGKLHYLIRWKGYSADSDTWEPEQT 426
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 352 KGKLHYLIRWKGYSADSDTWEPEQT 426
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 58 LIKFIMRKISKNRTDDDVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
++K M + K R +DDV + N + TA ++ + +E D ++DD
Sbjct: 231 ILKAQMEEAEKRREEDDVANKLNEVVEKLISTAKDSGKSQKEDEEEEDDDDDD 283
>U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform e protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 28 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 77
>U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform c protein.
Length = 424
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 128 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 177
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 486 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 535
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 523 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 572
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -3
Query: 232 WKCS-KNHHCFDRRFHQLQI 176
W C K+HH F RFHQ Q+
Sbjct: 640 WPCKPKSHHKFRVRFHQAQL 659
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -3
Query: 232 WKCS-KNHHCFDRRFHQLQI 176
W C K+HH F RFHQ Q+
Sbjct: 677 WPCKPKSHHKFRVRFHQAQL 696
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 523 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 572
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -3
Query: 232 WKCS-KNHHCFDRRFHQLQI 176
W C K+HH F RFHQ Q+
Sbjct: 677 WPCKPKSHHKFRVRFHQAQL 696
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 73 MRKISKNRTDD--DVXSSTNGSLLNDDQTATENKTVESVTDESVDQNNDD 216
MR S N D SSTNGS ++ T+ S+T + + N+DD
Sbjct: 486 MRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSITTTTSENNSDD 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,830,878
Number of Sequences: 27780
Number of extensions: 165729
Number of successful extensions: 477
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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