Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D24
(386 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 84 1e-15
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 79 2e-14
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 79 3e-14
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 77 9e-14
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 77 2e-13
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 73 1e-12
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 72 4e-12
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 71 1e-11
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 69 2e-11
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 66 2e-10
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 59 3e-08
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 58 8e-08
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 53 2e-06
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 52 3e-06
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 47 1e-04
UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5; Methanococ... 44 0.001
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 41 0.010
UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3; Archae... 39 0.029
UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1; ... 39 0.038
UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3; Methan... 38 0.089
UniRef50_Q975K6 Cluster: 50S ribosomal protein L34e; n=2; Sulfol... 33 1.9
UniRef50_UPI0000E4799B Cluster: PREDICTED: similar to zinc trans... 33 2.5
UniRef50_A0TX62 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_Q74NH0 Cluster: NEQ297; n=1; Nanoarchaeum equitans|Rep:... 33 2.5
UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;... 32 4.4
UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiell... 32 4.4
UniRef50_Q2MV35 Cluster: Hesp-642; n=1; Melampsora lini|Rep: Hes... 31 5.8
UniRef50_A0YA25 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 83.8 bits (198), Expect = 1e-15
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 9e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 79.4 bits (187), Expect = 2e-14
Identities = 42/66 (63%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV-K 345
CG C KL GI RP E S++ KKTV R YGG C CVK RIVRAFLIEEQKIV K
Sbjct: 120 CGDCGIKLPGIPALRPREYSQISRPKKTVSRAYGGSRCAGCVKDRIVRAFLIEEQKIVKK 179
Query: 346 VLKAQQ 363
VLK Q
Sbjct: 180 VLKESQ 185
Score = 31.9 bits (69), Expect = 4.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 41 VQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
+ R F R YNT+SN+ RI++TPG L KK PK
Sbjct: 81 IDRFLFYR---YNTRSNKVRIIKTPGGELRYLHIKKKGTAPK 119
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 79.0 bits (186), Expect = 3e-14
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 348
CG CK KL GI RP L R++ V R YGGV CHKCVK RI+RAFL EEQK +K
Sbjct: 44 CGDCKCKLAGIPALRPHLYRNLKKRERRVSRAYGGVRCHKCVKDRIIRAFLKEEQKALKK 103
Query: 349 LKAQQASTKSA 381
+ ++ + KSA
Sbjct: 104 VIEEREAKKSA 114
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQR+ RR YNT+SN++R V+TPG L + K + PK
Sbjct: 1 MVQRVVLRRHCRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPK 43
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 77.4 bits (182), Expect = 9e-14
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV-K 345
CG C S L+GI RP + + + KTV R YGG C CVK+RI+RAFLIEEQKIV K
Sbjct: 44 CGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRCANCVKERIIRAFLIEEQKIVKK 103
Query: 346 VLKAQQASTKSA 381
V+K Q + K +
Sbjct: 104 VVKEQTEAAKKS 115
Score = 46.0 bits (104), Expect = 3e-04
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
M QR+TFRRR YNT+SN+ ++V+TPG L KK PK
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPK 43
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 348
CG CK L GI P E L R++TV R YGG C CV+QRI+RAFL+EEQK+VK
Sbjct: 47 CGDCKKPLAGIPACAPYEMKHLKKRERTVARAYGGTKCPTCVRQRILRAFLLEEQKVVKS 106
Query: 349 LKAQQASTKSA 381
+ A++ K +
Sbjct: 107 VIAEKEQQKKS 117
Score = 39.5 bits (88), Expect = 0.022
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 35 KMVQRLTFRRRLSYNTKSNQRRIVRTPG 118
KM R+T+RR+ YNT SN+ R+V+TPG
Sbjct: 3 KMSPRVTYRRKCRYNTPSNRVRVVKTPG 30
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 73.3 bits (172), Expect = 1e-12
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV-K 345
CG CK L G+ RP L R +TV R YGG CH CVK RI+RAFL EEQK V +
Sbjct: 44 CGDCKRTLAGVSAVRPFLYKNLKRRNRTVSRPYGGSRCHNCVKDRIIRAFLKEEQKCVRR 103
Query: 346 VLKAQQASTKS 378
V+K ++ T++
Sbjct: 104 VVKERETRTRA 114
Score = 38.7 bits (86), Expect = 0.038
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQR+ +RRR Y T SN + VRTPG L L KK + P+
Sbjct: 1 MVQRVHYRRRNKYKTPSNVVKRVRTPGARLVLHNLKKVGKRPR 43
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 71.7 bits (168), Expect = 4e-12
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = +1
Query: 154 RRSQG--CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFL 321
+R+ G C +++GI RP+E RSRL ++TV R YGGVL V++RI+RAFL
Sbjct: 37 KRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFL 96
Query: 322 IEEQKIV-KVLKAQQASTKSA 381
+EEQKIV KVLK Q+A K A
Sbjct: 97 VEEQKIVKKVLKLQKAKEKVA 117
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRL +R R SY TKSNQ RIV+TPG L KK PK
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPK 43
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 70.5 bits (165), Expect = 1e-11
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK- 345
C CK+ ++G++ RPA+ R + + V R YGG +C KC K+RI+RAFL EEQK V+
Sbjct: 44 CADCKNPIQGVKALRPADNQRARKKDRKVSRAYGGSICAKCXKERIMRAFLFEEQKCVRQ 103
Query: 346 VLKAQQ 363
VLK ++
Sbjct: 104 VLKEKK 109
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
M QR+ +R+ YNTKSN+ R +RTPG L + V KK PK
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPK 43
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 69.3 bits (162), Expect = 2e-11
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 348
CG C L GI+ RP + L K+TV R YGGV CHKCV+++I+RAFLI E ++K+
Sbjct: 44 CGDCGCVLAGIRHIRPHQYGWLGKSKRTVTRAYGGVRCHKCVQKKILRAFLINEHNLIKL 103
Query: 349 LKAQ 360
A+
Sbjct: 104 AAAK 107
Score = 34.3 bits (75), Expect = 0.83
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPG 118
M R+T+ R+ SYNTKSN RIV+T G
Sbjct: 1 MAVRVTYVRKHSYNTKSNGIRIVKTAG 27
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 66.1 bits (154), Expect = 2e-10
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K P R C +C+SKLRGI RPA +RL ++TV R YGG LC C++ RI+ AFL
Sbjct: 36 KKPGRVPKCVKCRSKLRGIDICRPAAFARLRKSQRTVARTYGGNLCGSCLENRILDAFLS 95
Query: 325 EEQKIVKVLKAQQAS 369
E++++ K A+
Sbjct: 96 AEEQLLLGKKQTSAA 110
Score = 37.9 bits (84), Expect = 0.067
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPG 118
MVQ LT R R +YN SNQ++I RTPG
Sbjct: 1 MVQHLTHRGRRTYNNASNQKKIRRTPG 27
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 59.3 bits (137), Expect = 3e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +1
Query: 190 LRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 354
L G++ RP + +L R++TV R YGGVL +K RI+RAFL+EE KIVK +K
Sbjct: 53 LNGLKRIRPTKLKQLARRQRTVSRPYGGVLSAGALKNRIIRAFLVEEVKIVKQIK 107
Score = 39.1 bits (87), Expect = 0.029
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2
Query: 47 RLTFRRRLSYNTKSNQRRIVRTPG 118
R+T+RRR SYNT+SN+ R V+TPG
Sbjct: 4 RITYRRRTSYNTRSNKIRKVKTPG 27
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 57.6 bits (133), Expect = 8e-08
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K R C QCK + Q + +C KTV R +GGV+CH+ +RI+RAFLI
Sbjct: 34 KKQRIVSKCCQCKGEAVRNQAS---VHVCMCRCLKTVIRTFGGVICHR---ERIIRAFLI 87
Query: 325 EEQKIVKVLKAQQ 363
+EQK+VKVLKA Q
Sbjct: 88 DEQKVVKVLKALQ 100
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 53.2 bits (122), Expect = 2e-06
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 139 M*KSPRRSQGCGQC----KSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 306
M K +RSQG +L G + R + +K+V R YGGVL H V+ R+
Sbjct: 33 MQKRAKRSQGIHTPWVLGHKRLGGTKALRHIDARLASRHEKSVSRAYGGVLSHDQVRDRV 92
Query: 307 VRAFLIEEQKIVKVLKAQQASTK 375
VRAFL+EEQ+IVK + + K
Sbjct: 93 VRAFLVEEQRIVKQALKEHSKMK 115
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 47 RLTFRRRLSYNTKSNQRRIVRTPG 118
R+ +RRR+ Y T+ N+ ++VRTPG
Sbjct: 5 RVQYRRRMHYATRGNRMKMVRTPG 28
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 52.4 bits (120), Expect = 3e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K + C +C + L I RPAE SR + V R YG C +CV+++I+ AFL
Sbjct: 35 KKHSKKHRCHECNAILGSIARMRPAEFSRQKVSARRVNRPYGATTCGRCVREKIISAFLG 94
Query: 325 EEQKIV 342
E++IV
Sbjct: 95 NEERIV 100
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEE 330
C + ++ GI+ + E R+ ++TV R YGGV C VK RI+ AF+ EE
Sbjct: 45 CAETGKRINGIKCVKTCELRRMKKNQRTVSRPYGGVYCGAVVKDRIINAFMEEE 98
>UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5;
Methanococcus|Rep: Ribosomal protein L34e -
Methanococcus maripaludis
Length = 89
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIV 309
CG C + L G+ R E ++L +K +R +GG LC KCVK+ +V
Sbjct: 37 CGACGALLNGVPRGRAVEITKLAKTEKRPERPFGGNLCPKCVKKMMV 83
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 40.7 bits (91), Expect = 0.010
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRA 315
C +C L G+ RP RL K +R YGGVLC C+ + I A
Sbjct: 42 CARCGRPLGGVPRGRPPRVRRLSKTAKRPERPYGGVLCSTCLAEMIFEA 90
>UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3;
Archaea|Rep: 50S ribosomal protein L34e - Methanopyrus
kandleri
Length = 113
Score = 39.1 bits (87), Expect = 0.029
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 306
CG C +L G+ R E +K R YGGVLC +C ++ I
Sbjct: 37 CGACGRRLNGVMRGRNVELKNAPKTQKRPNRPYGGVLCPECARKLI 82
>UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 97
Score = 38.7 bits (86), Expect = 0.038
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
CG L+GI +RL + KKTV+R YGG L V+ IVRAF
Sbjct: 48 CGDTGVPLQGIPALVLVSLTRLSHNKKTVQRAYGGCLSANAVRS-IVRAF 96
>UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L34e -
Methanobacterium thermoautotrophicum
Length = 88
Score = 37.5 bits (83), Expect = 0.089
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 300
C C L G+ RP E +L KK R YGG C C ++
Sbjct: 37 CAGCGKPLHGVPRGRPYEIRKLSKSKKRPNRPYGGYYCSSCARK 80
>UniRef50_Q975K6 Cluster: 50S ribosomal protein L34e; n=2;
Sulfolobus|Rep: 50S ribosomal protein L34e - Sulfolobus
tokodaii
Length = 87
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI 306
C CK L+G++ + S+ +K +R+YGG +C+KC++ I
Sbjct: 37 CAICKKPLQGVKTNLLYKYSKT---EKRPERMYGGYICYKCLENLI 79
>UniRef50_UPI0000E4799B Cluster: PREDICTED: similar to zinc
transporter ZnT-2; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to zinc transporter
ZnT-2 - Strongylocentrotus purpuratus
Length = 379
Score = 32.7 bits (71), Expect = 2.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 292 HIYGRGHHHKHVSLFSYGSKDGNV 221
H +G GH H H SLF GSKD +
Sbjct: 190 HSHGGGHGHSHGSLFGGGSKDDEI 213
>UniRef50_A0TX62 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 949
Score = 32.7 bits (71), Expect = 2.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 108 GHRAGRLVYQYVKKPKKIPRLWSVQEQTPWYPAS 209
GH A R+ Y ++KPK+ ++W + PW A+
Sbjct: 110 GHNALRVQYVVIEKPKECGKVWVAFSERPWSDAT 143
>UniRef50_Q74NH0 Cluster: NEQ297; n=1; Nanoarchaeum equitans|Rep:
NEQ297 - Nanoarchaeum equitans
Length = 83
Score = 32.7 bits (71), Expect = 2.5
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 169 CGQCKSKLRGIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVR 312
C C L+G+ PA +S RKK V R +GG LCH+C ++ I R
Sbjct: 29 CAICGRPLQGVV-REPAYWLKSEPKQRKK-VSRKFGGYLCHECARRVIAR 76
>UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 1221
Score = 31.9 bits (69), Expect = 4.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 377 DLVLACCALRTFTIFCSSMRKALTMRCLTHLWQR 276
DL LA C T C+ AL CLT LW R
Sbjct: 421 DLTLAVCLSVFITFLCAFCLGALARPCLTRLWMR 454
>UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiella
natans|Rep: Ribosomal protein L34 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 90
Score = 31.9 bits (69), Expect = 4.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 241 RKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 348
+K + R+YG + HK VKQ+++ FL E K +++
Sbjct: 54 KKPRLSRIYGKEIHHKIVKQKLLIKFLKTENKSLRI 89
>UniRef50_Q2MV35 Cluster: Hesp-642; n=1; Melampsora lini|Rep:
Hesp-642 - Melampsora lini (Rust fungus)
Length = 140
Score = 31.5 bits (68), Expect = 5.8
Identities = 31/104 (29%), Positives = 44/104 (42%)
Frame = +1
Query: 67 TVVQHKIKSKKNSKDTGLAAWFISM*KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRK 246
T Q ++ KK SK+ G F++ + +Q CG CK +L I+P
Sbjct: 40 TPEQCRLALKKISKNRG----FLAFNSTTNYTQDCGGCKVELFSIEPLGGGVEMNAPIPM 95
Query: 247 KTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLKAQQASTKS 378
TVK + +L H C K I AF+ K V K S+ S
Sbjct: 96 NTVKNSFKYILAH-C-KGGIGTAFIGALDKNVTTAKILIDSSNS 137
>UniRef50_A0YA25 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 391
Score = 31.1 bits (67), Expect = 7.7
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCH-KCVKQRIVRAFLIEEQKIVKV 348
G + ++R IQ E++ L +K K++ K +KQ+I+ A+ + +QK +KV
Sbjct: 78 GAIQRRVRSIQQQLHKEQAELSSLQKQRKQLKADKQKQQKYIKQQIIAAYQVGQQKKIKV 137
Query: 349 LKAQQASTK 375
L Q+ K
Sbjct: 138 LLNQEQPEK 146
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,673,789
Number of Sequences: 1657284
Number of extensions: 7221946
Number of successful extensions: 16736
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16725
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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