Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D24
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 88 8e-18
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 84 2e-16
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 84 2e-16
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 84 2e-16
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 84 2e-16
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 84 2e-16
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 84 2e-16
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 45 7e-05
AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens ... 29 4.0
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 29 6.9
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 29 6.9
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 29 6.9
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 29 6.9
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 29 6.9
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 29 6.9
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 29 6.9
BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein. 29 6.9
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 29 6.9
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 29 6.9
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 29 6.9
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 29 6.9
AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein pr... 29 6.9
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 29 6.9
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 29 6.9
AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens ... 29 6.9
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 29 6.9
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 29 6.9
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 29 6.9
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 88.2 bits (209), Expect = 8e-18
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C KLRG++P RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGKLRGVRPVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQK-IVKVLKAQQASTKS 378
EEQK IVKVLKAQ S K+
Sbjct: 98 EEQKIIVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 83.8 bits (198), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 KSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLI 324
K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAFLI
Sbjct: 40 KAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLI 97
Query: 325 EEQKI-VKVLKAQQASTKS 378
EEQKI VKVLKAQ S K+
Sbjct: 98 EEQKIVVKVLKAQAQSQKA 116
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 47 RLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 166
RLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 40
>AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ35733 fis, clone TESTI2003277, weakly similar to
ANTER-SPECIFIC PROLINE-RICH PROTEIN APG PRECURSOR. ).
Length = 279
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 141 VKKPKKIPRLWSVQEQTPWYPAS*TC*TFPSLLP*ENSETCLWWC 275
++ P + P W ++ + PW S C P+ S TC WWC
Sbjct: 64 LRGPGRAPTCWPLRVRMPWRAGSRPC-RVPA------STTCGWWC 101
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 966 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1022
Query: 349 LK 354
++
Sbjct: 1023 ME 1024
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 966 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1022
Query: 349 LK 354
++
Sbjct: 1023 ME 1024
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 892 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 948
Query: 349 LK 354
++
Sbjct: 949 ME 950
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 901 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 957
Query: 349 LK 354
++
Sbjct: 958 ME 959
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 28.7 bits (61), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 335 FCSSMRKALTMRCLTHLWQRTPP 267
FCS++ L TH+W++ PP
Sbjct: 62 FCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 28.7 bits (61), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 335 FCSSMRKALTMRCLTHLWQRTPP 267
FCS++ L TH+W++ PP
Sbjct: 435 FCSALSSMLERHLSTHMWKKIPP 457
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 831 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 887
Query: 349 LK 354
++
Sbjct: 888 ME 889
>BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein.
Length = 338
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 261 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 317
Query: 349 LK 354
++
Sbjct: 318 ME 319
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 28.7 bits (61), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 335 FCSSMRKALTMRCLTHLWQRTPP 267
FCS++ L TH+W++ PP
Sbjct: 62 FCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 28.7 bits (61), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 335 FCSSMRKALTMRCLTHLWQRTPP 267
FCS++ L TH+W++ PP
Sbjct: 435 FCSALSSMLERHLSTHMWKKIPP 457
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1094
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 1017 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1073
Query: 349 LK 354
++
Sbjct: 1074 ME 1075
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 966 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1022
Query: 349 LK 354
++
Sbjct: 1023 ME 1024
>AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein
protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 204 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 260
Query: 349 LK 354
++
Sbjct: 261 ME 262
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens cDNA
FLJ38024 fis, clone CTONG2012996, highly similar to Mus
musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 966 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1022
Query: 349 LK 354
++
Sbjct: 1023 ME 1024
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 702 GQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 758
Query: 349 LK 354
++
Sbjct: 759 ME 760
>AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ14475 fis, clone MAMMA1001259, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 455
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 378 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 434
Query: 349 LK 354
++
Sbjct: 435 ME 436
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 966 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1022
Query: 349 LK 354
++
Sbjct: 1023 ME 1024
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 965 GQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 1021
Query: 349 LK 354
++
Sbjct: 1022 ME 1023
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEEQKIVKV 348
GQC + + + ++ + Y + K GG LCH C +QRI AFL + V+
Sbjct: 892 GQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTASPEQVRA 948
Query: 349 LK 354
++
Sbjct: 949 ME 950
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,597,830
Number of Sequences: 237096
Number of extensions: 1193457
Number of successful extensions: 2404
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2389
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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