Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D24
(386 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 0.70
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 0.70
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.70
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.70
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 0.92
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 2.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 6.5
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 6.5
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 8.6
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 20 8.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 8.6
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.8 bits (49), Expect = 0.70
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 375 LSARLLCLEDLHNFLFFNEEGSDNALLDTFMAEDTTINTFHCFLT 241
L +LC+ DLH L N N LL + + ++ F LT
Sbjct: 291 LICHILCMSDLHWQLPHNSTNPPNILL--YYRDSLALSVFALILT 333
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 0.70
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 164 WDLLGLFYILINQAASPVSLLFFFD 90
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 0.70
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 164 WDLLGLFYILINQAASPVSLLFFFD 90
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 0.70
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 164 WDLLGLFYILINQAASPVSLLFFFD 90
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.4 bits (48), Expect = 0.92
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 74 YNTKSNQRRIVRTPGW 121
Y KSN+++I ++ GW
Sbjct: 204 YTDKSNEKKIPKSSGW 219
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 2.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 123 RLVYQYVKKPKKI 161
RLVYQ+V PK I
Sbjct: 534 RLVYQFVDVPKDI 546
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 292 VKQRIVRAFLIEEQKIVKV 348
+ + I+R FLI +QK K+
Sbjct: 73 ITRYIIRMFLISQQKTSKL 91
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 292 VKQRIVRAFLIEEQKIVKV 348
+ + I+R FLI +QK K+
Sbjct: 56 ITRYIIRMFLISQQKTSKL 74
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 8.6
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = +3
Query: 228 PSLLP*ENSETCLWWC 275
P ++ + +TC W C
Sbjct: 455 PGMIKKQQGDTCCWVC 470
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = -1
Query: 110 SLLFFFDLILCCTTVXXXXXXXAPFSSFL 24
S++F CC + F+SFL
Sbjct: 60 SIIFVISFFGCCGAIRESHCMTITFASFL 88
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 8.6
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = +3
Query: 228 PSLLP*ENSETCLWWC 275
P ++ + +TC W C
Sbjct: 545 PGMIKKQQGDTCCWVC 560
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,891
Number of Sequences: 438
Number of extensions: 2278
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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