Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D23
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   3.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   4.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   6.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.4  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 256 LRVKGPVRMPT 288
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 256 LRVKGPVRMPT 288
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 89  IQQATWQPLXCQAKTSRNPRQRSPLFTASGS 181
           I Q T   L    K+  +PR  SP  T SGS
Sbjct: 52  ISQITNSTLDPGRKSPSSPRISSPSSTKSGS 82


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 177 PDAVNRGDLCLGFLDVFA*XYSGCHVAC*IPA-EINNFSIKNCSALKPEKPHV 22
           P+ +N  DLC      F      C++       +IN   +K  SALK + P++
Sbjct: 44  PEDINP-DLCTHINYAFVGLDKDCNIQVLDEENDINQGGLKRVSALKEKNPNL 95


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 101 TWQPLXCQAKTSRNPRQRSPLFT 169
           TW P+     ++ NP+   PL T
Sbjct: 477 TWMPVMRICVSAWNPKDCDPLIT 499


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = +1

Query: 127 KDIEKPQAEVSPIHRIRITL 186
           +++EK + ++S +H+  +T+
Sbjct: 92  REVEKAKRDLSSVHKTTLTI 111


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 343 RSLNLHHKEFYGW 305
           + LN+   EF+GW
Sbjct: 202 KELNMIFNEFFGW 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,345
Number of Sequences: 336
Number of extensions: 2478
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)