Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D22
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 245 6e-64
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 205 6e-52
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 176 4e-43
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 162 7e-39
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 158 9e-38
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 148 1e-34
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 147 2e-34
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 146 5e-34
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 145 9e-34
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 135 9e-31
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 128 1e-28
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 121 1e-26
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 114 1e-24
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 111 1e-23
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 110 3e-23
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 108 9e-23
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 108 1e-22
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 97 4e-19
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 94 2e-18
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 92 9e-18
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 92 1e-17
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 89 1e-16
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 89 1e-16
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 89 1e-16
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 88 1e-16
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 85 2e-15
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 83 5e-15
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 83 7e-15
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 81 2e-14
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 81 3e-14
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 80 5e-14
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 73 4e-12
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 66 5e-10
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 1e-07
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 49 1e-04
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 40 0.037
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.15
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.26
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.35
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.61
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.61
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 35 1.4
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 35 1.9
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.9
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.4
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 34 3.2
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 34 3.2
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 34 3.2
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 4.3
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 4.3
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.7
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 7.5
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 33 7.5
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 7.5
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 33 7.5
UniRef50_A7TLS2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.9
UniRef50_Q0C0N0 Cluster: Bifunctional enzyme ispD/ispF [Includes... 32 9.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 245 bits (600), Expect = 6e-64
Identities = 116/133 (87%), Positives = 124/133 (93%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
KVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 378 NFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
NFLGEKYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 558 LDGLYVSEKTTVV 596
LDGLYVSEKTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 205 bits (501), Expect = 6e-52
Identities = 96/132 (72%), Positives = 113/132 (85%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
+V+KW+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIR
Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIR 115
Query: 378 NFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
NFLGEKYI RV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTVKNKDI KF
Sbjct: 116 NFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKF 175
Query: 558 LDGLYVSEKTTV 593
LDG+YVSEK TV
Sbjct: 176 LDGIYVSEKGTV 187
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 190
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ +
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK 51
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 176 bits (428), Expect = 4e-43
Identities = 80/132 (60%), Positives = 103/132 (78%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
+V+ WFG+++ +AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIR
Sbjct: 55 QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 114
Query: 378 NFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
NFLGEK + +V M GVT++ S K KDEL+++GN +E VS SAALI Q VKNKDI KF
Sbjct: 115 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKF 174
Query: 558 LDGLYVSEKTTV 593
LDG+YVS+K T+
Sbjct: 175 LDGIYVSDKGTI 186
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 48
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 162 bits (393), Expect = 7e-39
Identities = 68/131 (51%), Positives = 98/131 (74%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
V+ WFG++K++A ++T+ S +ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRN
Sbjct: 73 VDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRN 132
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
F GEK + R+++ G+T + K KDE+++ GNSLE +S S A IQ + +K KD+ KFL
Sbjct: 133 FFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFL 192
Query: 561 DGLYVSEKTTV 593
DG+YVSE+ +
Sbjct: 193 DGIYVSERNVL 203
Score = 41.1 bits (92), Expect = 0.021
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 83 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 190
+TV VK R V V GPRG L ++F H +VDI +V +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKK 69
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 158 bits (384), Expect = 9e-38
Identities = 76/128 (59%), Positives = 95/128 (74%)
Frame = +3
Query: 210 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 389
W GS+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLG
Sbjct: 58 WHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLG 117
Query: 390 EKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGL 569
E+ +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V+NKDI KFLDG+
Sbjct: 118 ERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGI 177
Query: 570 YVSEKTTV 593
YVSE+ +
Sbjct: 178 YVSERGNI 185
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 41 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIR 175
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMK 47
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 148 bits (358), Expect = 1e-34
Identities = 70/129 (54%), Positives = 88/129 (68%)
Frame = +3
Query: 210 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 389
W +K A +RT + V NMIKGVT GFQYKMRAVYAHFPIN + EIRNFLG
Sbjct: 120 WHAGRKHAACLRTAQACVANMIKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLG 179
Query: 390 EKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGL 569
EK + + M GVT+ QKD++++EGN ++ VS SAAL+ +T V+NKDI KFLDG+
Sbjct: 180 EKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDIDLVSQSAALLHGATLVRNKDIRKFLDGI 239
Query: 570 YVSEKTTVV 596
Y + K TVV
Sbjct: 240 YCTGKDTVV 248
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 148
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 147 bits (356), Expect = 2e-34
Identities = 75/131 (57%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIE 371
KV G +K +AA+RTV S V+NMI GVTKG++YKMR VYAHFPIN V +G IE
Sbjct: 54 KVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIE 113
Query: 372 IRNFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIX 551
+RNFLG+K I V + GVT+ S KDE+++ GNS+EDVS +AA +QQ V+NKDI
Sbjct: 114 VRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIR 173
Query: 552 KFLDGLYVSEK 584
KFLDG+YVS K
Sbjct: 174 KFLDGIYVSHK 184
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVN 49
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 146 bits (353), Expect = 5e-34
Identities = 66/131 (50%), Positives = 92/131 (70%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
++ W+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++N
Sbjct: 65 IDMWYGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQN 124
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
FLGEK ++M GV V KDE+ +EGN +E VS SAA I + V+NKDI +FL
Sbjct: 125 FLGEKRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFL 182
Query: 561 DGLYVSEKTTV 593
DG+YVSEK +
Sbjct: 183 DGVYVSEKCLI 193
Score = 39.1 bits (87), Expect = 0.086
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
+ V IP+G+ + + + + V GPRG L R F+H VDI
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDI 46
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 145 bits (351), Expect = 9e-34
Identities = 69/128 (53%), Positives = 84/128 (65%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
V WF K A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRN
Sbjct: 53 VAVWFPRGKRNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRN 112
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
F+ + R++ PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD+ KFL
Sbjct: 113 FMHQIKTRRIECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDLRKFL 172
Query: 561 DGLYVSEK 584
DG YVS +
Sbjct: 173 DGCYVSSR 180
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 47 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAN 48
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 135 bits (326), Expect = 9e-31
Identities = 62/125 (49%), Positives = 85/125 (68%)
Frame = +3
Query: 210 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 389
W KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLG
Sbjct: 59 WMAGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLG 118
Query: 390 EKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGL 569
EK I ++ M GV + + +KDE+ + G+ L VS +AA IQQS KNKD+ KFLDG+
Sbjct: 119 EKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGI 178
Query: 570 YVSEK 584
Y+ K
Sbjct: 179 YIIMK 183
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 128 bits (308), Expect = 1e-28
Identities = 62/129 (48%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +EI+N
Sbjct: 64 VRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKN 123
Query: 381 FLGEKYIXRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
FLGEK I +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ VKNKDI +F
Sbjct: 124 FLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQF 183
Query: 558 LDGLYVSEK 584
LDG+YVSEK
Sbjct: 184 LDGIYVSEK 192
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 178
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQV 47
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 121 bits (292), Expect = 1e-26
Identities = 67/123 (54%), Positives = 84/123 (68%)
Frame = +3
Query: 225 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 404
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 405 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSEK 584
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DI KF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 585 TTV 593
T+
Sbjct: 128 GTM 130
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 114 bits (275), Expect = 1e-24
Identities = 48/73 (65%), Positives = 60/73 (82%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
+V KWFG +KE+AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIR
Sbjct: 54 RVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIR 113
Query: 378 NFLGEKYIXRVKM 416
NFLGEK + V +
Sbjct: 114 NFLGEKIVRPVPL 126
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERV 48
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 111 bits (268), Expect = 1e-23
Identities = 57/129 (44%), Positives = 77/129 (59%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 378 NFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
NFLGEK + R +M G V ++KD ++IEG SL DVS SA I KN+D F
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVF 191
Query: 558 LDGLYVSEK 584
LDG++V+E+
Sbjct: 192 LDGIFVTER 200
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 110 bits (264), Expect = 3e-23
Identities = 58/128 (45%), Positives = 83/128 (64%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
+ K F +K++A RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I N
Sbjct: 55 IYKDFPRRKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IEN 112
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
FLGEK + K+ PGVTV + E+I+EG E V +AA I+Q+T + D F
Sbjct: 113 FLGEKAPRKAKILPGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQ 169
Query: 561 DGLYVSEK 584
DG+Y+ EK
Sbjct: 170 DGIYIVEK 177
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
++V+IP+G+ V V+ V VKGP+G L+R F
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREF 39
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 108 bits (260), Expect = 9e-23
Identities = 57/128 (44%), Positives = 83/128 (64%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
+ K F KK++A VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I N
Sbjct: 55 IYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IEN 112
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
FLGEK R K+ PGVTV + E+ +EG E V +AA I+Q+T + D F
Sbjct: 113 FLGEKNPRRAKILPGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQ 169
Query: 561 DGLYVSEK 584
DG+Y+ EK
Sbjct: 170 DGIYIVEK 177
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
++++IP+G+ V V+ V VKGP+G L+R K+ V I
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQI 46
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 108 bits (259), Expect = 1e-22
Identities = 56/123 (45%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +3
Query: 210 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 389
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E + F+G
Sbjct: 66 WFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMG 125
Query: 390 EKYIXRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDG 566
K V GV + N KDE+ IEG +LEDVS I Q T +K+KD+ KFLDG
Sbjct: 126 HKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDG 185
Query: 567 LYV 575
+YV
Sbjct: 186 IYV 188
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 96.7 bits (230), Expect = 4e-19
Identities = 50/121 (41%), Positives = 74/121 (61%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
KK A V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+
Sbjct: 80 KKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHP 137
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSE 581
R K+ V S + ++ + G +E+ +AA ++Q+T +K KD F DG+Y+ +
Sbjct: 138 RRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVK 194
Query: 582 K 584
K
Sbjct: 195 K 195
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/121 (42%), Positives = 77/121 (63%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
K++LA + T S V N+ +GV G+ K++ VYAHFPI + +G I+ + NF GE+
Sbjct: 46 KRDLAILNTARSIVRNLCEGVGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSA 103
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSE 581
+ K+ G VV+ + +++I+ G+ L DVS +AA ++Q T VKNKD FLDG+YV E
Sbjct: 104 RKAKIVGGTKVVS---KGEDVIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYE 160
Query: 582 K 584
K
Sbjct: 161 K 161
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 92.3 bits (219), Expect = 9e-18
Identities = 50/121 (41%), Positives = 75/121 (61%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
K+ LA T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK
Sbjct: 58 KRILAMTGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQP 115
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSE 581
K+ GVTV DE+ I G E V ++AA I+ +T + +D F DG+Y++E
Sbjct: 116 RIAKIIEGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITE 172
Query: 582 K 584
+
Sbjct: 173 R 173
Score = 32.7 bits (71), Expect = 7.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
++V+IP G+ V + ++TV GP+G L R+ + +D+
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL 42
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/128 (35%), Positives = 72/128 (56%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
V ++ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N
Sbjct: 57 VRCYYNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITN 116
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
G K I + V V + K E+I+ +E + ++LIQ ++ NKD F+
Sbjct: 117 LFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFI 176
Query: 561 DGLYVSEK 584
DG+Y++ K
Sbjct: 177 DGIYLASK 184
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
VE WFG K A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRN
Sbjct: 118 VEMWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRN 177
Query: 381 FL 386
FL
Sbjct: 178 FL 179
Score = 40.7 bits (91), Expect = 0.028
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 38 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLV 110
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/133 (31%), Positives = 81/133 (60%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
+E F +++ A + ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N
Sbjct: 58 LETTFADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSN 115
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFL 560
+GEK I R K+ PGV V + +++++EG+ + +V+ +AA I+ ST + D F
Sbjct: 116 LIGEKNIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFS 172
Query: 561 DGLYVSEKTTVVL 599
DG+Y+ +K + L
Sbjct: 173 DGIYIYKKEVIGL 185
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 88.6 bits (210), Expect = 1e-16
Identities = 51/121 (42%), Positives = 75/121 (61%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
K++ A V T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK
Sbjct: 60 KEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKK- 116
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSE 581
R+ G T V +E+++ G + EDV +AA I+Q T +K D F DG+Y+ +
Sbjct: 117 PRIAKILGETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQ 174
Query: 582 K 584
K
Sbjct: 175 K 175
Score = 33.9 bits (74), Expect = 3.2
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 178
++IP+G++V + + T KGP+G ++R F + + I +
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEV 46
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/120 (40%), Positives = 72/120 (60%)
Frame = +3
Query: 225 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 404
K ++ + T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK
Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPR 115
Query: 405 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSEK 584
R + G T V +EL + G +E V +AA I+Q T + +KD+ F DG+Y++ K
Sbjct: 116 RTTI-HGDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 84.6 bits (200), Expect = 2e-15
Identities = 48/114 (42%), Positives = 73/114 (64%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
VE + +KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I N
Sbjct: 55 VETFHATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IEN 112
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 542
FLGE+ + PG V +KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 113 FLGERGKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 157
M+ + + V IP+G+ VHV + V V+GP G ++++F H
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSH 40
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 83.0 bits (196), Expect = 5e-15
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
KKE A T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK +
Sbjct: 62 KKEKALAGTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-V 118
Query: 402 XRVKMAP--GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYV 575
RV P V + K ++ + G E V +AA I++S +KN+D F DG+Y+
Sbjct: 119 PRVAALPWSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYI 178
Query: 576 SEK 584
K
Sbjct: 179 VSK 181
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 82.6 bits (195), Expect = 7e-15
Identities = 47/121 (38%), Positives = 72/121 (59%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
K++ A + T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+
Sbjct: 64 KRDYAILHTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAP 121
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSE 581
+ V+ PK +D +++ G D++ +AA I+ +T VKNKD FLDG+YV E
Sbjct: 122 RSTHIMGNTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYE 178
Query: 582 K 584
K
Sbjct: 179 K 179
Score = 33.5 bits (73), Expect = 4.3
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
+V+IP+G+TV ++ +GP G +NF+++ V I + +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIAD 52
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 81.4 bits (192), Expect = 2e-14
Identities = 47/129 (36%), Positives = 75/129 (58%)
Frame = +3
Query: 198 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 377
K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I
Sbjct: 53 KIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IE 110
Query: 378 NFLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKF 557
NF GE+ R G T V+ + D L + G S +DV +AA I+++T +K D F
Sbjct: 111 NFFGER-SPRTAEIVGETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVF 167
Query: 558 LDGLYVSEK 584
DG+Y+ K
Sbjct: 168 QDGIYLISK 176
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 80.6 bits (190), Expect = 3e-14
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
+E +F +++E + T SH++NM++GV F Y+++ Y HFP+ V EGN +I + N
Sbjct: 54 LETYFATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VEN 111
Query: 381 FLGEK--YIXRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKD 545
FLGEK I + V V + K + E+++E E A++I+QST K KD
Sbjct: 112 FLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKD 171
Query: 546 IXKFLDGLYVSEK 584
+F DG+++ K
Sbjct: 172 RRRFTDGIWLYYK 184
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/122 (32%), Positives = 70/122 (57%)
Frame = +3
Query: 219 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 398
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 78 NRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN- 136
Query: 399 IXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVS 578
+ RV Q ++I+ G E V +AA ++Q+T +K++D F DG+Y+
Sbjct: 137 VPRVAEIVDPENTEVIVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIV 196
Query: 579 EK 584
EK
Sbjct: 197 EK 198
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 73.3 bits (172), Expect = 4e-12
Identities = 41/109 (37%), Positives = 66/109 (60%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 380
+E + K+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I N
Sbjct: 59 MEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IEN 116
Query: 381 FLGEKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 527
FLG K + + GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 117 FLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 66.5 bits (155), Expect = 5e-10
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = +3
Query: 240 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXRVKMA 419
V T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK K+
Sbjct: 67 VGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIV 124
Query: 420 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYV 575
G V + D + I G + +AA I+++T +++ D F DG+++
Sbjct: 125 DGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 62.1 bits (144), Expect = 1e-08
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Frame = -1
Query: 596 HNSCFLRYIKTIQELXDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 417
+N R I TIQE DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 416 HLYPXDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 267
+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 255 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXRVKMAPGVTV 434
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 435 VNSPKQKDELI 467
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 190
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKK 51
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 201 VEKWFGSKKELAAVRTVCSHVENMIKGVTKG 293
V+KW+G++KELA V T+CS V+N IK VT G
Sbjct: 57 VDKWWGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 40.3 bits (90), Expect = 0.037
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAV 166
MK+++ +KV+IP+G +V + R++TV+G R R+ H +
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVL 43
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.15
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 154
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.5 bits (83), Expect = 0.26
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 423 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDI 548
GV + ++K+ LI+ N L +VS + ALI Q+ VKNKDI
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNKDI 166
Score = 37.1 bits (82), Expect = 0.35
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +2
Query: 104 RLVTVKGPRGVLKRNFKHLAVDIRM 178
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.35
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.61
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 157
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 36.3 bits (80), Expect = 0.61
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIV 46
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 35.1 bits (77), Expect = 1.4
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 FPGSCVKQSPNMKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGV 136
F C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 591 FSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 201 VEKWFGSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 308
V K +K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 60 VVKRSSDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 142
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.4
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 157
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 477 NSLEDVSSSAALIQQSTTVKNKDIXKFLDG 566
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 33.9 bits (74), Expect = 3.2
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +3
Query: 261 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXRVKMAPGVTVVN 440
+ NMIKGV+ GF+ K+ + F N + N I+ + +G + +K+ +T+
Sbjct: 80 IYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEV 136
Query: 441 SPKQKDELIIEGNSLEDVSSSAALIQ 518
+ ++I++ + + AA I+
Sbjct: 137 KMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 33.9 bits (74), Expect = 3.2
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
VA +KIP G+ V+V + +TVKG G L R H AV +
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKV 44
Score = 32.7 bits (71), Expect = 7.5
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +3
Query: 234 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXRVK 413
A T + + NM++GV GFQ K+ V + EG ++ +G + ++
Sbjct: 64 ALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNIE 117
Query: 414 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 521
M G+T V +P Q E+I++G + VS AA I++
Sbjct: 118 MPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 429 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXK 554
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1
Query: 596 HNSCFLRYIKTIQELXDILILDCSRLLNESSRARDIFQR 480
+N+C LR IK + L +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 7.5
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 178
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 32.7 bits (71), Expect = 7.5
Identities = 26/100 (26%), Positives = 49/100 (49%)
Frame = +3
Query: 222 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 401
K+E A T + + NM+KGVT+GF+ + V + +G + I N +G +
Sbjct: 60 KEERAMHGTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHP 113
Query: 402 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 521
++ PG+ ++ + + +I+ G E V AA I++
Sbjct: 114 VEIEEEPGIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
V + V+IP+G+ + + + VTVKGP+G L R
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSR 35
>UniRef50_A7TLS2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 502
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 220 DPNHFSTFRRARVYHANVNSQVFE--VPFENSAGPFNCHQTRFHMD 89
+PN F+T+ R ++ N ++ ++E +PFENS PFN + +D
Sbjct: 387 NPNIFATWWR-KLVGKNTDNDLYESPIPFENSPPPFNSREDEMVLD 431
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 9.9
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 411 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIXKFLDGLYVSEKTT 590
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q0C0N0 Cluster: Bifunctional enzyme ispD/ispF [Includes:
2-C-methyl-D-erythritol 4- phosphate
cytidylyltransferase (EC 2.7.7.60)
(4-diphosphocytidyl-2C- methyl-D-erythritol synthase)
(MEP cytidylyltransferase) (MCT); 2-C-
methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC
4.6.1.12) (MECPS) (MECDP-synthase)]; n=3; cellular
organisms|Rep: Bifunctional enzyme ispD/ispF [Includes:
2-C-methyl-D-erythritol 4- phosphate
cytidylyltransferase (EC 2.7.7.60)
(4-diphosphocytidyl-2C- methyl-D-erythritol synthase)
(MEP cytidylyltransferase) (MCT); 2-C-
methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC
4.6.1.12) (MECPS) (MECDP-synthase)] - Hyphomonas
neptunium (strain ATCC 15444)
Length = 378
Score = 32.3 bits (70), Expect = 9.9
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 435 VNSPKQKDELIIEGNSLEDVSSSAALIQQST-TVKNKDIXKFLDGLYVSEKTTVVLHD 605
V+ P+ +I+ G+ L D S+ +IQ + + + L +SE TVV+HD
Sbjct: 42 VDHPQISQVVIVAGDELGDCSAEPKIIQAKPGNTRTQSVLSGLAAATISEDATVVIHD 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,179,394
Number of Sequences: 1657284
Number of extensions: 11783792
Number of successful extensions: 28556
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 27677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28534
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -