Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D18
         (494 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1; ...    56   4e-07
UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gamb...    54   1e-06
UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;...    52   5e-06
UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;...    40   0.040
UniRef50_UPI0000499696 Cluster: hypothetical protein 95.t00022; ...    34   2.0  
UniRef50_A5FGF2 Cluster: Conserved repeat domain precursor; n=1;...    32   8.1  
UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza sat...    32   8.1  

>UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 108

 Score = 56.0 bits (129), Expect = 4e-07
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +1

Query: 76  CAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTXVHAYIHRCTRIDPDS 252
           C   T C W VY P ++ I+  M N  C C   T C  T+DD  + A+++RC + D ++
Sbjct: 49  CTDNTACGWAVYKPFTRSIENYMRNT-CSCPEPTKCIRTDDDLSISAFVYRCRKTDSET 106


>UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000019800 - Anopheles gambiae
           str. PEST
          Length = 115

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 24/61 (39%), Positives = 32/61 (52%)
 Frame = +1

Query: 49  QASGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTXVHAYIHR 228
           Q   NK   C   TPC W VY+P ++ I + M N  C C     C  T+DD  + AY++R
Sbjct: 45  QTHSNKT--CEGNTPCGWAVYTPATRAIDSFMKNT-CDCEKLKQCVRTDDDVSISAYVYR 101

Query: 229 C 231
           C
Sbjct: 102 C 102


>UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 106

 Score = 52.4 bits (120), Expect = 5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = +1

Query: 73  ICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTXVHAYIHRCTRID 243
           IC   TPC W VY+ +++ I   M N+ C C+ +  C   +DD  + AY++RC +ID
Sbjct: 45  ICQGRTPCGWAVYNKMTRFIDYFMRNK-CECNKEKRCLRDDDDISITAYVYRC-KID 99


>UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 134

 Score = 39.5 bits (88), Expect = 0.040
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 88  TPCAWTVYSPVSKMIQTNMTNRFCICSADT-TCAITEDDTXVHAYIHRC 231
           TPC W  Y+PV++     M N  C C  +T  C  T ++  + AY++ C
Sbjct: 66  TPCGWNTYNPVTRRSTIFMPNT-CKCPDETYKCVRTGENVSMSAYVYHC 113


>UniRef50_UPI0000499696 Cluster: hypothetical protein 95.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 95.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 893

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 9/34 (26%), Positives = 23/34 (67%)
 Frame = +2

Query: 374 LYIHYNFHYPFLHVDKYIILHVDIHRYNSHVLLF 475
           +Y+H +FH+ + H+ ++II ++++H +     +F
Sbjct: 335 MYLHTSFHHIYFHITRFIIFNINLHDFTIIYAIF 368


>UniRef50_A5FGF2 Cluster: Conserved repeat domain precursor; n=1;
           Flavobacterium johnsoniae UW101|Rep: Conserved repeat
           domain precursor - Flavobacterium johnsoniae UW101
          Length = 1518

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 336 VLSXSQDFV*MNKLFYSGAISCQHTKXXRVGINASASVNVRVHXCIVFGNSA 181
           VL+ +  F+      YSG+ S  +T     G  ++A+VN+ V   I+F NSA
Sbjct: 180 VLNANGSFIYNPNAGYSGSDSFTYTLTTASGKTSTATVNITVSTPIIFVNSA 231


>UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza
           sativa|Rep: PHD finger protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 175

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -3

Query: 159 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 37
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,306,475
Number of Sequences: 1657284
Number of extensions: 6854427
Number of successful extensions: 15248
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15226
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)