Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D18
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 30 1.1
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 29 1.9
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 29 1.9
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 29 1.9
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 29 2.4
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 KLPKQQKTP-GTAEMTQASGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTT 180
K ++ K P G+ M N+P C+P++PC + + V T + C + T
Sbjct: 510 KCKRECKNPCGSGTMLMTPTNEPRTCSPSSPCPSSHWCHVGITPDTTV----CCSAVQNT 565
Query: 181 CAIT 192
C +T
Sbjct: 566 CELT 569
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 46 TQASGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTXVHAYI 222
T + N P + A T A Y P+ + ++++ C CS TC T VH++I
Sbjct: 131 TDLASNLPFVTAYVTYLAAFFYFPLKFLYESDLK---CACSFIITCETTRIAMKVHSFI 186
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 358 GSNRLFLSTLV*PRLCINEQAIL*RCNKLSAYKXXTSRD-QCECICECTRALXYRLR**R 182
GS R +S C+N Q IL RC +S + RD +CE + E T + +
Sbjct: 87 GSARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEKVLE-TFCIGHADCGPN 145
Query: 181 MWCRLSKCRI 152
M C+ +KC++
Sbjct: 146 MLCQQNKCQL 155
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 10 PKQQKTPGTAEMTQASGNKPIICAPTTPCAWTVYSPVS 123
PKQ KTP T Q S P CA + + VS
Sbjct: 189 PKQAKTPSTTPSAQVSAGTTFNSTPAVSCATPLTATVS 226
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 19 QKTPGTAEMTQASG-NKPIICAPTTPCA-WTVYSPVSKM--IQTNMTNRFCICSADTTC 183
Q PG +T + N+P+ C P PC+ ++V + + +N N C S +T C
Sbjct: 18 QCPPGLIPLTSNNNFNQPLTCTPQDPCSCFSVSARYGAICHYSSNYNNYLCCHSQNTQC 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,034,197
Number of Sequences: 27780
Number of extensions: 180266
Number of successful extensions: 420
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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