Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D16
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   6.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 345 RKSFCFLLASDVXLALVRVF 286
           ++  C+LLA  V LALV +F
Sbjct: 131 KRLLCYLLARYVALALVILF 150


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 345 RKSFCFLLASDVXLALVRVF 286
           ++  C+LLA  V LALV +F
Sbjct: 149 KRLLCYLLARYVALALVILF 168


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/43 (20%), Positives = 17/43 (39%)
 Frame = +1

Query: 88  TVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAE 216
           T+S  CK        +  H+ V F +++   ++    G    E
Sbjct: 31  TISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTE 73


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/43 (27%), Positives = 16/43 (37%)
 Frame = -1

Query: 643 ILXVFXXNNTKRLVVSWPRVVRAGVSESGFGFVASSCVNAVYW 515
           IL +      KR +V  P      V + GF  +     N  YW
Sbjct: 558 ILKMDQNGQIKRNLVDAPLKDTVTVPDGGFTIIRFKATNPGYW 600


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 350 SWCPDTAKVXKKMLYSSSFDALKKSLARSSEVHPSDRPL 466
           SW   +  + +   YS+ + +L  SLA S+ +  S + L
Sbjct: 197 SWLDMSGGMHQMANYSTDYSSLTHSLAASNHLLSSGQHL 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,497
Number of Sequences: 336
Number of extensions: 2525
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)