Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D16
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.51 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.67 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.67 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.67 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.67 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.3  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 362 DTAKVXKKMLYSSSFDALK 418
           DTAKV +K+ YSS+F  L+
Sbjct: 257 DTAKVFQKIFYSSAFSKLR 275


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 91  VSDACKTTYEEIKKDKKHRYVVFYIRD 171
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 91  VSDACKTTYEEIKKDKKHRYVVFYIRD 171
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 91  VSDACKTTYEEIKKDKKHRYVVFYIRD 171
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 47  ILSACSPYFEQIFVENKHPHPIIYLRD 73


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 91  VSDACKTTYEEIKKDKKHRYVVFYIRD 171
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHLHPIIYLRD 121


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 503  RHRSPINSIYTRARDETEPALRHS 574
            RHRS + +  TR + +TE A+RH+
Sbjct: 1794 RHRSLVTATKTRKKQQTE-AIRHA 1816


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 435 VQKYIQATDLSEASXEAVEXKLR 503
           ++KY++  DLSE   E ++ +L+
Sbjct: 896 IEKYLKPLDLSEKQKEEMKSQLK 918


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 18/69 (26%), Positives = 26/69 (37%)
 Frame = +2

Query: 359  PDTAKVXKKMLYSSSFDALKKSLARSSEVHPSDRPLGSVSXGRRXEAPRHRSPINSIYTR 538
            PDTA      LY+         LA ++   P DR L S+   +   +P      N   T 
Sbjct: 1268 PDTAVPDPHSLYAIPNKVKPSPLAGAAVPKPMDRSLRSILAEQSELSPIKPCQTNPFRTS 1327

Query: 539  ARDETEPAL 565
               + + AL
Sbjct: 1328 TPSKEDEAL 1336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,080
Number of Sequences: 2352
Number of extensions: 11025
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)