Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D16
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 69 3e-12
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 69 3e-12
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 41 7e-04
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 41 7e-04
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 41 7e-04
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 32 0.40
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 32 0.40
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 32 0.40
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 32 0.40
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 2.1
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 2.8
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.6
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 27 8.6
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 8.6
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 73 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 246
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 247 -GGTGECRYGLFDFEYTHQCQGHVG 318
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 272 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSLARSS 439
A + + + S K+ + +CPD A V ++MLY+SS ALK SL S
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 73 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 246
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 247 -GGTGECRYGLFDFEYTHQCQGHVG 318
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 272 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSLARSS 439
A + + + S K+ + +CPD A V ++MLY+SS ALK SL S
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +1
Query: 73 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 210
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 211 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 294
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 296 TSARXTSEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSL 427
T +R + SK K+ + CPD A + KKM+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +1
Query: 73 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 210
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 211 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 294
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 296 TSARXTSEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSL 427
T +R + SK K+ + CPD A + KKM+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +1
Query: 73 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 210
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 211 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 294
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 296 TSARXTSEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSL 427
T +R + SK K+ + CPD A + KKM+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 314 SEASKKQKLFLMSWCPDTAKVXKKMLYSSSFDALKKSLARSS 439
SE S K+ L++ CPD A V ++MLY+SS ALK SL S
Sbjct: 147 SEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASLGLES 185
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.40
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 212 PNTNSSSRICRRAVPGNADMACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKKML 391
P+T SSS+ RRAV AD L T+A T+ A K +K CP + +
Sbjct: 103 PST-SSSKSQRRAVARFADDGALPA---TAAYHTTSAPKLRKG--PQSCPGGYRDESDVS 156
Query: 392 YSSSFDALKKSLARSSEV-HPSDRPLGSVSXGRRXEAPRHRSPINSIYTRARDETE 556
Y S + K + R +V H S R ++ GR+ + RH S S + R + +E
Sbjct: 157 YESDKYSQKSNSHRRRDVLHQSMRQNYTIDEGRKPSSRRHHSS-KSDFRRRGESSE 211
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.40
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 212 PNTNSSSRICRRAVPGNADMACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAKVXKKML 391
P+T SSS+ RRAV AD L T+A T+ A K +K CP + +
Sbjct: 38 PST-SSSKSQRRAVARFADDGALPA---TAAYHTTSAPKLRKG--PQSCPGGYRDESDVS 91
Query: 392 YSSSFDALKKSLARSSEV-HPSDRPLGSVSXGRRXEAPRHRSPINSIYTRARDETE 556
Y S + K + R +V H S R ++ GR+ + RH S S + R + +E
Sbjct: 92 YESDKYSQKSNSHRRRDVLHQSMRQNYTIDEGRKPSSRRHHSS-KSDFRRRGESSE 146
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 341 FLMSWCPDTAKVXKKMLYSSSFDALKKSLARSSEVHPSDRPLGSVSXGRRXEAPRHRSPI 520
FL S+C D A + + SSS + S+A S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 521 NSI 529
NS+
Sbjct: 1060 NSV 1062
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 341 FLMSWCPDTAKVXKKMLYSSSFDALKKSLARSSEVHPSDRPLGSVSXGRRXEAPRHRSPI 520
FL S+C D A + + SSS + S+A S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 521 NSI 529
NS+
Sbjct: 1060 NSV 1062
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 287 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 186
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 287 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 186
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 584 RQGRSVGERVRFRRELVCKCC 522
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -2
Query: 501 GASXRRPXETLPRGRSLGCTSELRARDFF----RASNELEYNIFXLTLAVSGHHDI 346
G R + P G + G ++ D F ++SN +EYN F + ++ +HD+
Sbjct: 72 GGLNREDQQPGPSGNNDGQYHVMQNNDSFAQHMQSSNTIEYNSFEMPTVINSNHDV 127
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -2
Query: 501 GASXRRPXETLPRGRSLGCTSELRARDFF----RASNELEYNIFXLTLAVSGHHDI 346
G R + P G + G ++ D F ++SN +EYN F + ++ +HD+
Sbjct: 58 GGLNREDQQPGPSGNNDGQYHVMQNNDSFAQHMQSSNTIEYNSFEMPTVINSNHDV 113
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 464 LGSVSXGRRXEAPRHRSPINSIYTRARDETEPA 562
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 462 GRSLGCTSELRARDFFRASNELEYNIFXLTLAVSGHHDIRKSF 334
GR T EL+ R E+ N+ +L HHD+R++F
Sbjct: 2215 GRLAQFTKELQERKDDMVQLEMAKNMIIPSLKGDAHHDLRRNF 2257
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 462 GRSLGCTSELRARDFFRASNELEYNIFXLTLAVSGHHDIRKSF 334
GR T EL+ R E+ N+ +L HHD+R++F
Sbjct: 2215 GRLAQFTKELQERKDDMVQLEMAKNMIIPSLKGDAHHDLRRNF 2257
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 464 LGSVSXGRRXEAPRHRSPINSIYTRARDETEPA 562
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 462 GRSLGCTSELRARDFFRASNELEYNIFXLTLAVSGHHDIRKSF 334
GR T EL+ R E+ N+ +L HHD+R++F
Sbjct: 2215 GRLAQFTKELQERKDDMVQLEMAKNMIIPSLKGDAHHDLRRNF 2257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,358,007
Number of Sequences: 27780
Number of extensions: 230798
Number of successful extensions: 802
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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