Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D12
         (540 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         28   0.23 
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.7  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 0.23
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 434 SSRTDCRRPHQRRPLREEYHSCR 366
           SS+TD R P Q  P  +++ SCR
Sbjct: 315 SSKTDHRHPFQYHPTYDQHKSCR 337


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 125 NGSIAEAV-NLSKQRNTIFVVFIQGDNDLSDEMSSTLNDVVVRSKLSNESN 274
           N S+ +A  ++ +Q   + V  I+ ++   DE  ++L+ VVV  ++  ESN
Sbjct: 58  NNSVLQAYKDVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEESN 108


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 188  IQGDNDLSDEMSSTLNDVVVRSKLSNESN-FLAVN 289
            I GD+ LSD + S     ++ S L +  N  LA+N
Sbjct: 1987 ISGDHILSDVLLSNHQSQIITSALYSSGNESLAIN 2021


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 188  IQGDNDLSDEMSSTLNDVVVRSKLSNESN-FLAVN 289
            I GD+ LSD + S     ++ S L +  N  LA+N
Sbjct: 1988 ISGDHILSDVLLSNHQSQIITSALYSSGNESLAIN 2022


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,294
Number of Sequences: 2352
Number of extensions: 9276
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)