Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D09
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +2

Query: 245 ICAPTTPCAWTV-YSPVSXMIQTNMTNRFCI--CSADTTCAITEDDTEVHA 388
           IC P T C+WT   S V   +    +  FCI   +  T  ++ ED+ +  A
Sbjct: 142 ICYPLTYCSWTSRRSKVMVYLAWVASLAFCIPQLTIFTYTSVGEDEYDCWA 192


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 619 CMSTCNIIYLSTCKN 575
           C S  N +Y S C+N
Sbjct: 160 CFSMLNYVYSSKCEN 174


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 543 LLYIHYNFHYPFLHVDKYIILHVDIHRYNSHVLLF 647
           LL I+Y F+Y F+    +++L V I+ +    LLF
Sbjct: 235 LLCIYY-FYYAFILFTVHLLLLVCIYYFYYMHLLF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,851
Number of Sequences: 336
Number of extensions: 2434
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)