Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D09
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3094|AAO41237.1|  711|Drosophila melanogaster CG18135-P...    32   0.78 
AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p pro...    29   7.3  
AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-P...    29   7.3  

>AE014296-3094|AAO41237.1|  711|Drosophila melanogaster CG18135-PC,
           isoform C protein.
          Length = 711

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 175 CRRLSGICYLEPVPWEHWQPRKHK 104
           CR LS  C  +P+PW  WQ    K
Sbjct: 27  CRALSSRCITDPLPWHSWQSPAQK 50


>AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 190 CFGSLCRRLSGICYLEPVPWEHWQPRK 110
           C   +CR ++ IC +E    EHW P +
Sbjct: 26  CLEKVCRAMNIICEMEYFGLEHWTPNQ 52


>AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-PA
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 190 CFGSLCRRLSGICYLEPVPWEHWQPRK 110
           C   +CR ++ IC +E    EHW P +
Sbjct: 26  CLEKVCRAMNIICEMEYFGLEHWTPNQ 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,603,571
Number of Sequences: 53049
Number of extensions: 455490
Number of successful extensions: 944
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)