Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D07
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 8e-58
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 8e-58
SB_56| Best HMM Match : Actin (HMM E-Value=0) 220 8e-58
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 220 8e-58
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 8e-58
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 9e-24
SB_54| Best HMM Match : Actin (HMM E-Value=0) 101 4e-22
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 8e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 1e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 5e-12
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 7e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 8e-07
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 42 3e-04
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 36 0.025
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.53
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.2
SB_10490| Best HMM Match : Toxin_27 (HMM E-Value=6.4) 30 1.2
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 2.1
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 29 3.7
SB_23197| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 28 6.5
SB_46582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 220 bits (537), Expect = 8e-58
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 414
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 415 PEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PEEHPVLLTEAPLNPKANR+KMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 151
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +2
Query: 131 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
++ LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 220 bits (537), Expect = 8e-58
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 414
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 415 PEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PEEHPVLLTEAPLNPKANR+KMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 150
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 220 bits (537), Expect = 8e-58
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 414
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 415 PEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PEEHPVLLTEAPLNPKANR+KMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 150
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 220 bits (537), Expect = 8e-58
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 414
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 415 PEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PEEHPVLLTEAPLNPKANR+KMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 151
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
LVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 220 bits (537), Expect = 8e-58
Identities = 102/113 (90%), Positives = 105/113 (92%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVA 414
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 415 PEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PEEHPVLLTEAPLNPKANR+KMTQIMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 151
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +2
Query: 122 ATXKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
A + LV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 ADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 107 bits (256), Expect = 9e-24
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = +1
Query: 271 KDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTF-YNELRVAPEEHPVLLTEA 447
KD V DEA +L + YP+++GIV NWDDM +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 448 PLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
PLNP NR+KM ++MF + +Y+AIQAVL+LYA G TG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTG 154
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGK 232
+V DNG+G K G+AG + P +FPS G+
Sbjct: 9 IVCDNGTGFVKCGYAGSNFPAHIFPSMVGR 38
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 101 bits (242), Expect = 4e-22
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = +1
Query: 373 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLY 552
K+W H F ++LRV E+ PVLLTEAPLNPK NR++M Q+MF +FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 553 ASGRTTG 573
ASGRTTG
Sbjct: 2189 ASGRTTG 2195
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGK 232
+V+DNGSG CKAG + D++PR VFP+ G+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGR 2126
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = +1
Query: 235 PAIRAVMVGMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTF 393
P + VMVGMG KDSYV DEAQSK GILTLKYPIEHGIVTNWDDM KI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 466 NRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
N M +IMF TFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTG 113
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGKAPPSG 247
LV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/51 (66%), Positives = 45/51 (88%)
Frame = +1
Query: 421 EHPVLLTEAPLNPKANRQKMTQIMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
+HPVLLTEAPLNP+ NR+K ++ F TFN PA+++++QAVLSLYA+GRTTG
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTG 176
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.1 bits (159), Expect = 5e-12
Identities = 27/81 (33%), Positives = 51/81 (62%)
Frame = +1
Query: 331 PIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRQKMTQIMFXTFNT 510
PI+ G++ +WD KI + + ++ HP+L++EA N + R+K+T++MF +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 511 PAMYVAIQAVLSLYASGRTTG 573
PA ++ +VL+ +A+GR+ G
Sbjct: 63 PAFFLCKNSVLTAFANGRSNG 83
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 487 IMFXTFNTPAMYVAIQAVLSLYASGRTTG 573
IMF FN+PA+YVAIQAVLSLYASGRTTG
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTG 29
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +1
Query: 259 GMGXKDSYVXDEAQSKXGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPEEHPVLL 438
G+ D ++ DEA K T K+PI H IV +WD M + W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPSHRGK 232
LV+D GS M K GFAGDDAP+ VFP G+
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGR 1388
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 143 LVVDNGSGMCKAGFAGDDAPRAVFPS 220
+V+DNG G+ K GFAGD PR + P+
Sbjct: 703 IVLDNGCGISKIGFAGDRVPRIIQPA 728
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 216 GNTARGASSPAKPALHIPEPLSTT 145
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 216 GNTARGASSPAKPALHIPEPLSTT 145
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -1
Query: 217 GKHCARSIISCEAGLAHTGAIVYYQA 140
G++ + SI+S E GLAHTGAI+ Q+
Sbjct: 9 GENGSGSIVSGETGLAHTGAIIDNQS 34
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 322 LKYPIEHGIVTNWDDMXKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRQ 474
L+ P + +VT+++ ++ H F + P HPV++TE NP RQ
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 216 GNTARGASSPAKPALHIPEPLSTT 145
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 527 PSKPCSRCTRPVVPP 571
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_10490| Best HMM Match : Toxin_27 (HMM E-Value=6.4)
Length = 211
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -3
Query: 560 PDAYSESTAWMATYMAGVLNVXNMIWVIFCLLALGLRGASVSRTGCS 420
PD ++ ++ ++A V+ + + +V FCL + RG VS + S
Sbjct: 117 PDPQNDKVFFIRRFLASVIRINGIAFVTFCLASALRRGIPVSESSFS 163
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 280 YVXDEAQSKXGILTLKY--PIEHGIVTNWDDMXKIWHHTFYNE 402
++ D+ + L Y P + G + NWD +IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 131 KLPRLVVDNGSGMCKAGFAGDDAPRAV 211
K+ LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 155 NGSGMCKAGFAGDDAPRAVFPSHRGKAPPSGP*WSV-WDXR 274
+G CK + GD V HRG PP P WS W R
Sbjct: 2859 SGYDGCKKCYCGDSYQSFVRTYHRGYCPPKDP-WSCEWRSR 2898
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = -3
Query: 335 MGYLRVRIPXLLCASSXT*ESXCPIPTITALMA-GPSHDARETLREEHHLLRSRPCTYRS 159
M +RVR P LC S CP + +M+ P + H ++ PC Y +
Sbjct: 866 MSRIRVRAPMSLCRYVHVVMSICPCRYVHVVMSLCPCRYFEDKSARAHVVMTLCPCRY-A 924
Query: 158 HCLLPSAATXSSHIVELVFN*IVXVXNK*INLLLHSFVSCC 36
H ++ + H+V + + V + + +H +S C
Sbjct: 925 HVVMSMSLCRYVHVVMSLCSCRYVVMSMSLCRYVHVVMSLC 965
>SB_23197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Frame = -2
Query: 348 DSVFDGVFEG--QDTXFALCLISYIR--VLXSHTDHHGPDGGAFPRCEGNTARGASSPAK 181
D F+ + EG D CL V+ H H G RC+ A S +
Sbjct: 3 DEYFESLLEGGAADIESLECLTQSATGAVVALHVARHVNTNGTDTRCQHEEAVADSPDCE 62
Query: 180 PALHIPEPLST-TKRGNXF 127
A+ +P P S TK+ + F
Sbjct: 63 SAIPVPNPTSLGTKKSHLF 81
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 216 GNTARGASSPAKPALHIPEPLSTT 145
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 216 GNTARGASSPAKPALHIPEPLSTT 145
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 426 PRPAY*GSPQPQGQ---QTEDDPDHVXNIQHARHVRXHPSRALAVRVRSYHR 572
PR A +P+PQ + Q+ +PDHV + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_46582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 191 LLRSRPCTYRSHCLLPSAATXSSHI 117
+LR+RP T+R LPS T +H+
Sbjct: 58 ILRNRPITFRLQVCLPSLQTAFNHL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,062,070
Number of Sequences: 59808
Number of extensions: 404805
Number of successful extensions: 3121
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3111
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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