Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D06
(547 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 30 0.018
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.88
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.88
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.7
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.7
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 6.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 6.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.2
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 8.2
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 29.9 bits (64), Expect = 0.018
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +3
Query: 351 VNLLGAMRVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFA---AYSASKAGL 521
+NLLG +I L ++K I I+N+ GL LP AY ASK L
Sbjct: 114 INLLGLTCMIQEVLKLMKKKGINNGI-----IVNINDASGLNLLPMNRNRPAYLASKCAL 168
Query: 522 WALTRCL 542
LT CL
Sbjct: 169 TTLTDCL 175
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 0.88
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 111 AGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKDNPKYKFHAV 275
AG +E A + E L + PL R +Q F NP Y F +V
Sbjct: 1007 AGPPINLEARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSV 1061
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.88
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 111 AGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKDNPKYKFHAV 275
AG +E A + E L + PL R +Q F NP Y F +V
Sbjct: 1003 AGPPINLEARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSV 1057
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 2.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +3
Query: 297 TVGKYEWMTASMIESPVHVNLLGAMRV-ISAFLPEIRKTA----IETTSKPKPRIINVGS 461
++ K TA M + P + + V +SA + +R A + P P I N+ +
Sbjct: 366 SIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPPIPNMSN 425
Query: 462 HCGLQPLP 485
G+ PLP
Sbjct: 426 MSGMPPLP 433
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 375 LSSRRANSHEPGFLSSMLSSIRT 307
LSS ++ HEPG ++ +++I T
Sbjct: 641 LSSTHSHPHEPGAPATTITTITT 663
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.8 bits (44), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 356 IHMNRAFYHRCCHPFVLS 303
+++ RAF C HP V S
Sbjct: 28 MYLVRAFCRNCIHPTVFS 45
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 4.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 356 IHMNRAFYHRCCHPFVLS 303
+++ RAF C HP V S
Sbjct: 476 MYLVRAFCRNCIHPTVFS 493
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 6.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 454 LVAIVACSLCPPSLH 498
L ++ C +C PS+H
Sbjct: 7 LSLLITCLICSPSVH 21
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 6.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 279 NNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVI 380
NNA + T +T + +PV +N+ G +I
Sbjct: 526 NNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSII 559
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 87 AREGFITIAGMHKGI 131
A EGF + MH G+
Sbjct: 160 ANEGFCAVISMHDGL 174
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 87 AREGFITIAGMHKGI 131
A EGF + MH G+
Sbjct: 155 ANEGFCAVISMHDGL 169
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,363
Number of Sequences: 438
Number of extensions: 3150
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -