Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D04
(422 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 186 1e-46
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 163 1e-39
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 139 2e-32
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 136 2e-31
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 127 1e-28
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 126 2e-28
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 122 3e-27
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 106 2e-22
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 101 5e-21
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 87 2e-16
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 76 3e-13
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 74 1e-12
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 2e-12
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 61 8e-09
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 55 7e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 46 2e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 46 3e-04
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 46 4e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 42 0.004
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 39 0.048
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.064
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 38 0.11
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.26
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 36 0.26
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 36 0.34
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 36 0.34
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 0.45
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 36 0.45
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 0.60
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.60
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 1.8
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 2.4
UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 4.2
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 5.6
UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 32 5.6
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 5.6
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 5.6
UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25 ... 31 7.4
UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Re... 31 7.4
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 7.4
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 31 7.4
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 186 bits (454), Expect = 1e-46
Identities = 89/102 (87%), Positives = 94/102 (92%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRD
Sbjct: 23 RLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRD 82
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 417
NYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 83 NYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 163 bits (396), Expect = 1e-39
Identities = 75/100 (75%), Positives = 89/100 (89%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRD
Sbjct: 23 RLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRD 82
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
NYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 83 NYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 139 bits (337), Expect = 2e-32
Identities = 66/100 (66%), Positives = 78/100 (78%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEEERERRD
Sbjct: 78 RLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRD 137
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
NYVPE SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 138 NYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 136 bits (328), Expect = 2e-31
Identities = 64/103 (62%), Positives = 82/103 (79%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEEERE RD
Sbjct: 24 RLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRD 82
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 420
NYVPE+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 83 NYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 127 bits (306), Expect = 1e-28
Identities = 58/96 (60%), Positives = 77/96 (80%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVP 303
+F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVP
Sbjct: 81 NFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVP 140
Query: 304 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
E+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 141 EISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 126 bits (304), Expect = 2e-28
Identities = 59/100 (59%), Positives = 80/100 (80%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE ERR
Sbjct: 60 RLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE--ERRA 117
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
+Y+PEVSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 118 DYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 122 bits (294), Expect = 3e-27
Identities = 57/99 (57%), Positives = 77/99 (77%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEEERERR
Sbjct: 23 RMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRM 82
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 408
++VPE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 83 DFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 106 bits (255), Expect = 2e-22
Identities = 53/100 (53%), Positives = 73/100 (73%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + ER +++
Sbjct: 72 RLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKE 124
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 125 TYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 101 bits (243), Expect = 5e-21
Identities = 47/85 (55%), Positives = 65/85 (76%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
+LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEEERERR
Sbjct: 63 KLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRL 122
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLK 366
+YVPE S+++ D + D D K ML+
Sbjct: 123 DYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 86.6 bits (205), Expect = 2e-16
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
+L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEEERERR
Sbjct: 23 KLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRM 82
Query: 292 NYVPEVSALEHDI---IEVDPDTKDMLKMLD 375
++ P S ++ I + VD T ML+ L+
Sbjct: 83 DHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 76.2 bits (179), Expect = 3e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVP 303
DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVP
Sbjct: 27 DFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVP 85
Query: 304 EVSALEHDIIEVDPDTKDMLKMLDFNNIN 390
E S L+ +I EVD TK+MLK+ F +++
Sbjct: 86 EGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 74.1 bits (174), Expect = 1e-12
Identities = 33/85 (38%), Positives = 55/85 (64%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRD 291
RL FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEERER++
Sbjct: 23 RLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKE 82
Query: 292 NYVPEVSALEHDIIEVDPDTKDMLK 366
N +P+ S L+ D +EVD T +M+K
Sbjct: 83 NVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 202 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 381
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 61.3 bits (142), Expect = 8e-09
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +1
Query: 115 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERR 288
LT+DF NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E
Sbjct: 24 LTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEIN 83
Query: 289 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 390
+ S E + VD +TK M+K L F N N
Sbjct: 84 NKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 304 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 411
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 54.8 bits (126), Expect = 7e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 231
T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 25 TTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1
Query: 115 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 249
LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 24 LTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 112 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 219
+ T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 23 KFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 45.6 bits (103), Expect = 4e-04
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNY 297
T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE + Y
Sbjct: 25 TVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEITMTDEEEY 82
Query: 298 VPEV 309
+ +
Sbjct: 83 IRRI 86
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 213
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER 285
T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E R
Sbjct: 25 TEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR 80
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 38.7 bits (86), Expect = 0.048
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 115 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEEERERRD 291
L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D
Sbjct: 41 LSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKD 98
Query: 292 NYVPEVSALEHDIIEVDP 345
V L+ +++ +P
Sbjct: 99 IVCQNVGFLQINMLMSEP 116
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.3 bits (85), Expect = 0.064
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIKLQEEERERRD 291
DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K E+E +
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASKSLEQEAQVEP 81
Query: 292 NYVPEVSALEHDIIEVDPDTK 354
V E E P+T+
Sbjct: 82 EPVEATENTEAPAAEETPETE 102
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 37.5 bits (83), Expect = 0.11
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 219
T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 25 TGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 0.26
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 244 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 420
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 36.3 bits (80), Expect = 0.26
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 231
T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 25 TKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 35.9 bits (79), Expect = 0.34
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -1
Query: 212 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLT 69
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFT 64
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.9 bits (79), Expect = 0.34
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 225
T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 25 TGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.5 bits (78), Expect = 0.45
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 219
DF NK E++A + TK +RN+IAG+ T M
Sbjct: 27 DFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 35.5 bits (78), Expect = 0.45
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 219
DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.1 bits (77), Expect = 0.60
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 118 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 213
T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 24 TDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.60
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFAT 210
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 1.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +1
Query: 142 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 315
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 316 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 399
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 193 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 369
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 370 LD 375
L+
Sbjct: 506 LE 507
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 124 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 213
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_Q23DU0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 644
Score = 32.7 bits (71), Expect = 3.2
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 172 TKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 288
TKP N+ GF + ++ +Q++ S K++EEERE+R
Sbjct: 206 TKPKVNRPQGFTIGQILKIEENQIQYKSKKIEEEEREQR 244
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 4.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 208 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 363
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 5.6
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 226 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 390
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q2J914 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=7; Actinomycetales|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase - Frankia
sp. (strain CcI3)
Length = 482
Score = 31.9 bits (69), Expect = 5.6
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 145 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEH 324
+C ++ + P + L + G+ + L+ RH VRG+ + + E+ + V E
Sbjct: 203 VCRKLGLRPGERLLDIGCGWGSMLIHAARHHGVRGVGVTISVEQATQARRLVAEADLA-- 260
Query: 325 DIIEV 339
D+IE+
Sbjct: 261 DVIEI 265
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 5.6
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +1
Query: 229 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 390
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 5.6
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 238 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 339
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_UPI000065E659 Cluster: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164).; n=1;
Takifugu rubripes|Rep: Probable RNA-binding protein 25
(RNA-binding motif protein 25) (RNA- binding
region-containing protein 7) (Protein S164). - Takifugu
rubripes
Length = 661
Score = 31.5 bits (68), Expect = 7.4
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 139 KRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER---RDNYVPEV 309
KR EE+ I + L L RR H R + Q++ERER D+ V E
Sbjct: 346 KREKEELEEIRQRLLDEGHPNPDAELRRREHHRGSRSHRDRRQDQERERPAHTDHEVEEG 405
Query: 310 SALEHDIIEVDPDTKDMLK 366
E+D E +P+TK LK
Sbjct: 406 EEEEYDNDEDNPETKPCLK 424
>UniRef50_Q10LQ3 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 544
Score = 31.5 bits (68), Expect = 7.4
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +1
Query: 196 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 375
A +++HL+RR+ + K Q EE ++ + + + LEHD+I + +T D+LK L+
Sbjct: 41 AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 7.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 285 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 157
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 31.5 bits (68), Expect = 7.4
Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS-QVRGISIKLQEE 273
+D NK++ +E + +K ++N+IAG+ T ++ ++ + + S +L+E+
Sbjct: 28 YDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKISKNKVEAQEASEELEED 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,062,471
Number of Sequences: 1657284
Number of extensions: 6574207
Number of successful extensions: 18662
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 18268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18651
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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