Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D03
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   3.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.7  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 581 FAFTFLXSKFVIFIIGRMLTTSV--LYNSALII 489
           F F F  SKF  F+I  +   S+  L+N  LII
Sbjct: 223 FFFRFEKSKFEPFLISNISLVSLIFLFNCTLII 255


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 267 RCNKDRPDGVKPSKKKLGTEIGK 335
           RCN+ RPD +  S+ K    I K
Sbjct: 459 RCNEIRPDAICVSQLKNALSIDK 481


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 339 AAEKSRGLFNADDWQCNKCANVNWA 413
           A     G F  +D   N C +VN+A
Sbjct: 32  ANRPGNGKFTPEDIDANLCTHVNYA 56


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQ 590
           +R+  SSD+E    G  K +RK+ Q
Sbjct: 65  KRKSISSDEENSFQGKHKSRRKAPQ 89


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -3

Query: 479 VTGTSFNFTKFWCIAHITRLTPSPIHIGTFIALPIISVEKAA 354
           +T T+      +C+  + R+T + I I T + L  I+  K++
Sbjct: 271 LTDTAHMINYAFCVQQLLRITVAFISIVTALFLVAINFNKSS 312


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -3

Query: 479 VTGTSFNFTKFWCIAHITRLTPSPIHIGTFIALPIISVEKAA 354
           +T T+      +C+  + R+T + I I T + L  I+  K++
Sbjct: 271 LTDTAHMINYAFCVQQLLRITVAFISIVTALFLVAINFNKSS 312


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 254 PTSKINISATWITANPVAVVHFAND 180
           P  K+ +S    TA+P + V  AND
Sbjct: 93  PNLKVMLSVGGATASPDSFVAAAND 117


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 492 YNRRRNRYELQLHQILVHCTHYTFD 418
           Y  +RNR+  +   +L+   H  FD
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHLMFD 144


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 492 YNRRRNRYELQLHQILVHCTHYTFD 418
           Y  +RNR+  +   +L+   H  FD
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHLMFD 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,180
Number of Sequences: 336
Number of extensions: 3388
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)