Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_D03
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2299| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 33 0.20
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 31 0.81
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 31 1.1
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 30 1.9
SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20) 29 3.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.3
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 29 4.3
SB_23642| Best HMM Match : Neuromodulin (HMM E-Value=4.7) 29 4.3
SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65) 29 4.3
SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 28 5.7
SB_16027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_41186| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_19741| Best HMM Match : RVT_1 (HMM E-Value=2.2) 27 9.9
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 27 9.9
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 27 9.9
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 27 9.9
>SB_2299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 375 DWQCN--KCANVNWARRQTCNVCNAPKFGEVEARTGYGGGYNERGVVXYRRREHSSDDEY 548
DW C KC N+N+ARR +CN C GYGGGYNERG V Y+ +E SDDEY
Sbjct: 12 DWVCPDPKCGNMNFARRSSCNRCGR----------GYGGGYNERGTVEYKPKE-ESDDEY 60
Query: 549 DE 554
DE
Sbjct: 61 DE 62
Score = 59.3 bits (137), Expect = 3e-09
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3
Query: 189 KMNDGDWICSDPSCGNINFARRASCYRCNK 278
K++DGDW+C DP CGN+NFARR+SC RC +
Sbjct: 7 KLSDGDWVCPDPKCGNMNFARRSSCNRCGR 36
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
Frame = +3
Query: 207 WICSDPSCGNINFARRASCYRCNKDRPDGVKPSKKKLGTEIGKSAAEKSRGLFNADDWQC 386
W C+ SCG +N A+ C+ C+ D+ KP+ K + ++ ++ WQC
Sbjct: 3008 WDCA--SCGCVNSAKSHQCFGCSLDKVGLEKPAPKSMIQDL-------------SEKWQC 3052
Query: 387 NKCANVNWARRQTCNVC------NAPKFGEVEARTGYGGGYNERGVVXYRRREHSSDDEY 548
+ C + R C C +P E R G +E+ + S+ Y
Sbjct: 3053 DSCYVHHPDERGFCLACGNSRYKGSPPSDEQSKRLQQPEGTDEQDAPNSPEKAVQSEPWY 3112
Query: 549 DEFGXKKRKRKSEQQDKNKTQAHQTE 626
+ + ++ E+++ + H+ E
Sbjct: 3113 WTWLFSRPPQQPEEKESEEANEHEQE 3138
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 375 DWQCNKCANVNWARRQTCNVCNAPKFGEVEARTGYGGGYNERG 503
+W C C N A +TC C PK G + T + G ++G
Sbjct: 2118 EWDCETCLVRNTAESKTCPACQTPKPGATQ--TSHLTGVTKQG 2158
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 375 DWQCNKCANVNWARRQTCNVCNAPKFGE 458
+W C C N A C C PK GE
Sbjct: 2309 EWDCETCLVHNAADCTICPACQTPKPGE 2336
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +3
Query: 201 GDWICSDPSCGNINFARRASCYRCNKDRPDGVKPSKKKLGTEIGKSAAEKSRGLFNAD-- 374
G W C +C N A +C C +P G KP+ + + S GLFN
Sbjct: 1726 GSWECG--TCMIQNKADVTTCVACEASKP-GSKPAPS--------ATSSTSNGLFNKQAP 1774
Query: 375 ---DWQCNKCANVNWARRQTCNVCNAPK 449
W C+ C N C C +PK
Sbjct: 1775 PTGSWTCDTCWISNKEADSRCAACQSPK 1802
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/94 (26%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Frame = +3
Query: 198 DGDWICSDPSCGNINFARRASCYRCNKDRPDGVKPSKKKLGTEIGKSAAEKSRGLFNAD- 374
+G W C +C N C C +P G + K S+ F
Sbjct: 1830 EGSWECD--TCMVNNKGSDTKCVACETAKP-GANSTASKTPAFGASSSTFPVLEKFAPPP 1886
Query: 375 -DWQCNKCANVNWARRQTCNVCNAPKFGEVEART 473
W C+ C VN A C C PK G A T
Sbjct: 1887 GSWTCDTCMIVNKAEHLKCLACETPKPGAKPAET 1920
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 RPDGVKPSKKKLGTEIGKSAAEKSRGL--FNAD--DWQCNKCANVNWARRQTCNVCNAPK 449
+P VKPS+ ++ KS+A + L F W+C C N A TC C A K
Sbjct: 1692 KPASVKPSENSTRSDDKKSSAPATNLLEAFRPPPGSWECGTCMIQNKADVTTCVACEASK 1751
Query: 450 FGEVEA 467
G A
Sbjct: 1752 PGSKPA 1757
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 483 GGYNERGVVXYRRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQ 611
G + + RR+ SS E D + K+R+ +EQ++++K++
Sbjct: 883 GSVGSKADIEDNRRKRSSSRESDRYSIKRRRHDNEQEERSKSK 925
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 474 GYGGGYNERGVVXYRRREHSSD--DEYDEFGXKKRKRKSEQQDKNKTQAHQTED 629
GY GYN+ R E+ D D D +G R +S +D ++ ED
Sbjct: 1382 GYSNGYNDNQPKEKRSSEYQDDPRDNRDSYGDYSRSSRSSYEDHPRSSRSSYED 1435
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 399 NVNWARRQTCNVCNAPKFGEVEARTGYGGGYNERGVVXYRRREHSSDDEYDEFGXKKRKR 578
+V W R +C + G V + GGG E+ V +++ +++ D D FG + +
Sbjct: 313 DVKWCPRNPAMICTSSFDGHVSCFSLMGGGATEQAV--EQQKVNNAFDVDDPFGSQLNQS 370
Query: 579 KSEQQDKNKT 608
+QQ T
Sbjct: 371 PPQQQPAETT 380
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
++++ D + DE G KKRKR+ + ++ + Q + E+ E+ E
Sbjct: 746 KKKKEDGDVDEDEGGKKKRKRRRKHKNDSGDQFEELENDDEEDE 789
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +3
Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
RRR ++ +E +E ++ ++ E++++ + + QTE+ EQ E
Sbjct: 64 RRRRKNNTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEQTE 107
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 207 WICSDPSCGNINFARRASCYRCNKDRPD 290
W+C P C IN R C C ++RP+
Sbjct: 259 WVC--PQCTLINIPTRPGCAMCGEERPE 284
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 474 GYGGGYNERGVVXYRRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
G+GG +++RG V E DE K K +SE++D+ T E + E
Sbjct: 160 GFGGLFHKRGEVTKPEEEPEEKDE------AKEKYESEEKDEGSTDEKDLESSGDDTE 211
>SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 372 DDWQCNKCANVNWARRQTCNVC 437
D W+C+KC +N + C VC
Sbjct: 156 DSWECDKCKTMNHPMTRRCVVC 177
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKT-QAHQTEDGAEQXE 647
++R+ +SD+E ++ K K ++DK K +A + +DG E+ E
Sbjct: 493 KKRKRTSDNESEKEETTPSKLKKSKKDKKKAKEATEEDDGEEKKE 537
>SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20)
Length = 744
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 477 YGGGYNERGVVXYRRREHSSDDEYD 551
Y GG N+ V+ + H DD+YD
Sbjct: 196 YAGGDNDDDVILMKAESHDDDDDYD 220
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 522 REHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQ 641
R H+S D KKRKR+ E ++++ ++ ++ G E+
Sbjct: 98 RRHASSSPEDSPPKKKRKRRVESEERSPFKSRHSKKGKER 137
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 492 NERGVVXYRRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAE 638
+ +G ++E SS+D+ + +K K+K++ + K KTQA Q E
Sbjct: 167 DNKGKKTQAKQESSSEDDSSDEEDEKPKKKADNKGK-KTQAKQESSSEE 214
>SB_23642| Best HMM Match : Neuromodulin (HMM E-Value=4.7)
Length = 286
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 483 GGYNERGVVXYRRREHSSDDEYDEFGXKKRKRKSEQQDKNKT 608
GG + G V +R+++S E + KK RKS DK ++
Sbjct: 4 GGISIEGNVSSNQRDNNSQPEEAQIHSKKEPRKSSGSDKMRS 45
>SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65)
Length = 290
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 522 REHSSDDEYDEFGXKKRKRKSEQQDKNK 605
R+ ++ +EF K+K+K++Q++KNK
Sbjct: 172 RDQIESEQSEEFVKSKKKKKNKQKEKNK 199
>SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1082
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKT 608
RRRE D+ + K++KR+ EQ+DK +
Sbjct: 459 RRRESGDTDDSVKARKKEKKRREEQRDKESS 489
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 378 WQCNKCANVNWARRQ--TCNVCNAPKFGEVE 464
+QC+KC ++N+ R CN C K+ + +
Sbjct: 1881 YQCHKCRSINYDERDPFLCNACGFCKYAKFD 1911
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 519 RREHSSDDEYDEFGXKKRK-RKSEQQDKNKTQAHQTEDGAEQXE 647
R E + DE + K+RK +K E++DK+K + ED + E
Sbjct: 440 REEAAGGDEEQKEKMKERKDKKEEKKDKDKDKDKDEEDDSSDSE 483
>SB_16027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 480 GGGYN--ERGVVXYRRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
GGG+ ++G+ +RR+ + + E + + R ++ + + H T++G E+ +
Sbjct: 34 GGGFIILKKGMSGNKRRQRNQEVEDSSYSRRARAETRGDRETKRWRIHHTQEGHERKQ 91
>SB_41186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 426 CNVCNAPKFGEVEARTGYGGGYNERGVVXYRRREHSSDDEYD-EFGXKKRKRKSEQQ 593
CNVC+ + G ++R + R E SS D+ F KRKR+ E++
Sbjct: 84 CNVCDCVVKDSINFLDHINGKKHQRNMGMSMRVERSSLDQVKRRFETNKRKREEEKK 140
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
+ ++ D+E +E G K +K K++++DK K + ++ E E
Sbjct: 863 KSKKDDEDEEAEEDGEKTKKGKTDKKDKPKEKKKKSGKEDEDEE 906
>SB_19741| Best HMM Match : RVT_1 (HMM E-Value=2.2)
Length = 593
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 240 NFARRASCYRCNKDRPDGVKPSKKKLGTEIGKSAAEKSRGLFNADDWQCNKCANVNW 410
NFA + +C N +P+ K SKK L + S EK R N + W+ K A ++W
Sbjct: 72 NFANKPTCRLINPTKPEIGKISKKIL--DRINSVIEKKR---NFNQWKSTK-AVIDW 122
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 525 EHSSDDEYDEFGXKKRKRKSEQQD-KNKTQAHQTEDGAE 638
E ++DD+ D+F K++++D K+K Q ++ +D E
Sbjct: 131 EEANDDDNDDFALSASSGKNKKKDKKDKKQKNKIDDDKE 169
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 564 KKRKRKSEQQDKNKTQAHQTEDGAEQXE 647
KK+KRK ++Q K K + + E+ E+ E
Sbjct: 13 KKKKRKKKKQKKQKKKKEEEEEEEEENE 40
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 183 VRKMNDGDWICSDPSCGNINFARRAS 260
VR N G W +DP C +IN AS
Sbjct: 1183 VRTCNHGRWTGNDPQCVDINECNSAS 1208
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 549 HIHHRKNAHDVCTXQLRAHYNRRRNRYELQLHQILVHCTHYTFDAE-PNSH 400
H HH + + R HYNR R + H+ H ++ + PN H
Sbjct: 175 HHHHPSTIIIILRHRHRQHYNRHRRHHHHHRHRHHHHHPNHPYSHHYPNHH 225
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,927,662
Number of Sequences: 59808
Number of extensions: 397050
Number of successful extensions: 1559
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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