Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_D03
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.22 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.3  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 453  GEVEARTGYGGGYNERGVVXYRRREHSSDDEYDEFGXKKRKRKSE-QQDKNKTQAHQTED 629
            GE + R   GGG + +     RR      D  +E G   RKRK +      K +    ++
Sbjct: 941  GEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDE 1000

Query: 630  GAEQXE 647
            G  Q +
Sbjct: 1001 GLSQKQ 1006


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 RRREHSSDDEYDEFGXKKRKRKSEQQDKNKTQAHQTEDGAEQ 641
           R  E    +   +FG KK+K++    D+++ +  Q +   EQ
Sbjct: 39  RELERKRAEGESDFGRKKKKKEIRYDDEDEDEGPQPDPTLEQ 80


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 372 DDWQCNKCANVNWARRQTCNVCNA 443
           D+   + C    ++ R++C+VC+A
Sbjct: 71  DETDTDFCVQTGYSNRKSCDVCHA 94


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 558 GXKKRKRKSEQQDKNKTQAHQTEDGAE 638
           G   ++R  E  D  K++   T+DG+E
Sbjct: 433 GSSSQERGMESSDDAKSETSSTKDGSE 459


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 558 GXKKRKRKSEQQDKNKTQAHQTEDGAE 638
           G   ++R  E  D  K++   T+DG+E
Sbjct: 433 GSSSQERGMESSDDAKSETSSTKDGSE 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,420
Number of Sequences: 2352
Number of extensions: 13283
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)