Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_C20
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       85   1e-18
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   1.1  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   3.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 85.4 bits (202), Expect = 1e-18
 Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
 Frame = +1

Query: 130 FPLGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAXVLELAGNASKD-LKVKRITPRH 306
           FP+GRIHR L+    +  RVG  A VY AA++EYL A VLELAGN ++D  K +RI PR 
Sbjct: 10  FPVGRIHRLLRKGNYAE-RVGPGAPVYLAAVMEYLAAEVLELAGNRARDNKKERRIIPR- 67

Query: 307 LQLAIXGXEELDSLI-KATIAGGGVIPHIHKSLIGKK 414
           LQLAI   EE + L+ + TIA GGV+P+I   L+ K+
Sbjct: 68  LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKR 104


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 356 QLSLAEASSHTYTNLSLERKAVLVHPFNF 442
           Q+ +  AS++    LS++R   + HP NF
Sbjct: 306 QVCVTYASTYVLVALSIDRYDAITHPMNF 334


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -3

Query: 240 CCKIF-QNSGRINCCR 196
           C ++F  N+GR++CCR
Sbjct: 328 CGRLFISNNGRVSCCR 343


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 420 SWCTRLILSYXMTKLYCI 473
           SWC R  L+  + K YC+
Sbjct: 801 SWCKRNGLTICIEKCYCV 818


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,041
Number of Sequences: 2352
Number of extensions: 9675
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)