Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C17
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 214 1e-54
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 214 2e-54
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 204 1e-51
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 161 1e-38
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 160 3e-38
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 159 5e-38
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 157 3e-37
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 142 5e-33
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 142 9e-33
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 127 2e-28
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 120 4e-26
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 117 2e-25
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 99 8e-20
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 95 1e-18
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 78 2e-13
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 75 1e-12
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 67 4e-10
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 62 8e-09
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 50 5e-05
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 46 0.001
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 45 0.002
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 43 0.005
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 42 0.013
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 37 0.48
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 37 0.48
UniRef50_A2XIU1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 33 7.7
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 214 bits (523), Expect = 1e-54
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 214 bits (522), Expect = 2e-54
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 153 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 192
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 204 bits (499), Expect = 1e-51
Identities = 105/169 (62%), Positives = 127/169 (75%), Gaps = 6/169 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI------SLAGCNRNCE 466
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ++A R
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP-R 261
Query: 467 XHXKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
+++ G L S + V+G+ PHD+ID++N G++ +
Sbjct: 262 SMARELKGTCKEVLGTAQS------VGCTVDGKHPHDVIDELNEGSIEV 304
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
K +K + +D++ IA +M RSMAR L G+ KE+LG
Sbjct: 235 KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 276
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 161 bits (392), Expect = 1e-38
Identities = 92/192 (47%), Positives = 119/192 (61%), Gaps = 29/192 (15%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDW------- 283
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIA T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 284 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 412
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 413 NIKHNGNISL-----AGCNRNCEXHXKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHD 577
NIKHN +I L K++ G V L S + V+GR P D
Sbjct: 121 NIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFS------VGCQVDGRSPKD 174
Query: 578 LIDDINSGALTI 613
+ DD+ +G + I
Sbjct: 175 VSDDVKAGEIDI 186
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 160 bits (388), Expect = 3e-38
Identities = 76/108 (70%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Frame = +2
Query: 122 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATS-DWKGLKI 298
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIA T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 299 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISL 442
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSL 169
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 426 TATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
T L D+I +A +M +S A+ L+G+VKEILG
Sbjct: 164 TGNCSLDDIIEVARVMRPKSCAKNLAGTVKEILG 197
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 159 bits (386), Expect = 5e-38
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +2
Query: 122 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKIT 301
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIA +T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 302 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLA 445
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ +
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFS 162
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 157 bits (380), Expect = 3e-37
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = +2
Query: 161 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 340
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 341 VVPSAAALIIRALKEPPRDRKKQKN 415
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 142 bits (345), Expect = 5e-33
Identities = 67/165 (40%), Positives = 104/165 (63%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++L + ++
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARA-VEEK 119
Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTIDE 619
+ F + + L V+G+P +I INSG L +++
Sbjct: 120 SLAKTFTGTVKQVLGTAQSLGATVDGQPVKAIIGKINSGELKVEK 164
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 142 bits (343), Expect = 9e-33
Identities = 70/153 (45%), Positives = 104/153 (67%)
Frame = +2
Query: 161 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 340
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 341 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQINGPVPFWLSKRD 520
VVP++A+++++ L E PRDRKK KNIKHNGN+ + + K+ + F + ++
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQV-YSIARAMKEKSRAKEFRGTVKE 143
Query: 521 SWAQHSQLDVLVEGRPPHDLIDDINSGALTIDE 619
+ + V+G+ P + + I++G + + +
Sbjct: 144 ILGTCNSIGCTVDGKKPTTIQEMIDNGDIDVPD 176
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 127 bits (307), Expect = 2e-28
Identities = 64/105 (60%), Positives = 72/105 (68%)
Frame = -2
Query: 435 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 256
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 255 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGSNLGGIL 121
SPTF GD+P GPI GAK APTSPPT K+ L SFGSN GGIL
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSNFGGIL 105
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 120 bits (288), Expect = 4e-26
Identities = 68/167 (40%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Frame = +2
Query: 140 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV 316
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI AT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 317 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGN------ISLAGCNRNCEXHXK 478
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG+ + +A R+ +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 479 QINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTIDE 619
++G V ++ + V+G+ P ++ +I++G + + +
Sbjct: 125 SLSGTV------KEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPD 165
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 117 bits (282), Expect = 2e-25
Identities = 79/160 (49%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Frame = +2
Query: 131 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQL 310
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 311 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI-SLAGCNRNCEXHXKQIN 487
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI S N + + ++
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 488 GPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
+ + + AQ L V+GR PH +IDDINSGA+
Sbjct: 226 RELSGTIKELLGTAQ--SLGCNVDGRHPHKIIDDINSGAV 263
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 99.1 bits (236), Expect = 8e-20
Identities = 45/104 (43%), Positives = 70/104 (67%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI 436
++ +NRQ ++VVP+A++L+++AL E PR K + + H G +
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTV 104
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 95.5 bits (227), Expect = 1e-18
Identities = 49/106 (46%), Positives = 67/106 (63%)
Frame = -1
Query: 442 KGDVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGXG 263
KGDV+ V +FLL +++ L+G DD+G R + L LSVL+ Q HSD +TLP+T G
Sbjct: 44 KGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLG 103
Query: 262 NVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGH 125
+VI HLF RQT+ + GQ GTD P Q+HDF+ + V+L H
Sbjct: 104 DVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 82.6 bits (195), Expect = 7e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +2
Query: 158 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLT 313
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/105 (38%), Positives = 63/105 (60%)
Frame = -1
Query: 433 VAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGXGNVI 254
V VFD+ +L +++ L+ D++ NN LSVL+ QL+S+L+TL + G G++
Sbjct: 78 VTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIF 137
Query: 253 THLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 119
T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 138 TNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXAT-SDWKGLKITVQLTVQNRQA 331
K+V ++ GG+V + S LA KIGP GLSPKK+G+D A T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 332 QIAVVPSAAALIIRALK 382
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 235
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 41.1 bits (92), Expect = 0.022
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 441 LQDVIGIAXIMXNRSMARYLSGSVKEILG 527
L DV +A +M RSMAR+LSG+VKEILG
Sbjct: 76 LDDVTNVAKVMRPRSMARHLSGTVKEILG 104
Score = 33.9 bits (74), Expect = 3.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 413 NIKHNGNISLAGCNRNCE-----XHXKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHD 577
++KHNGNI+L + + ++G V L S + V+G PHD
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQS------VGCTVDGMAPHD 120
Query: 578 LIDDINSGALTIDE 619
+ID INSG + I++
Sbjct: 121 VIDKINSGEIEIED 134
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 62.5 bits (145), Expect = 8e-09
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +2
Query: 374 ALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH--XKQINGPVPFWLSKRDSWAQHS 538
A KEPPRDRKKQKNIKH+GNI+ + R ++++G + L S
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQS----- 228
Query: 539 QLDVLVEGRPPHDLIDDINSGAL 607
+ V+GR PHD+IDDINSGA+
Sbjct: 229 -VGCNVDGRHPHDIIDDINSGAV 250
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 287 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 186
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 155 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV--QNRQ 328
++V + GG A L P IGPLG++ +V +I T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 329 AQIAV-VPSAAALIIRAL 379
+I V +P ALI + L
Sbjct: 64 FEIEVGIPPTTALIKKEL 81
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 44.8 bits (101), Expect = 0.002
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Frame = +2
Query: 155 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLK--ITVQLTVQNRQ 328
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 329 AQIAV-VPSAAALIIRAL--KEPPRD--RKKQKNIKHNGNISLAGCNRNCEXHXKQINGP 493
I V VP+ +L+++A+ +EP D KK N+ I+ + + K +
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKIGNLDLE-QIADIAIKKKPQLSAKTLTAA 122
Query: 494 VPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSG 601
+ L S + + VEG+ P D+I +I+ G
Sbjct: 123 IKSLLGTARS------IGITVEGKDPKDVIKEIDQG 152
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV--QNRQ 328
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 329 AQIAV-VPSAAALI 367
++ V +P A+ALI
Sbjct: 64 FEVEVGIPPASALI 77
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 41.9 bits (94), Expect = 0.013
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +2
Query: 179 GGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV---QNRQAQIAV-V 346
GG+ + P +GPLGL+ +V +I T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 347 PSAAALIIRALKEPPRDRKKQKNIKHNGNI 436
P +AL+ + L KK++ + N +
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVAGNATL 100
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 37.5 bits (83), Expect = 0.27
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = -1
Query: 457 PITSCKGDVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPV 278
P+ ++++ + +F LF T + + +D C G S++ L +++ +HS + T+P
Sbjct: 281 PVHKLVKELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPT 340
Query: 277 T 275
T
Sbjct: 341 T 341
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 36.7 bits (81), Expect = 0.48
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 401 KKQKNIKHNGNISLAG-CNRNCEXHXKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHD 577
K QK+IKH+G+IS N + + + + + + +Q + V+G PHD
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQ--SVGCNVDGCHPHD 127
Query: 578 LIDDINSGAL 607
+IDDINSGA+
Sbjct: 128 IIDDINSGAV 137
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 399 VKSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILGHS 533
+K++K + + + + M +RS+AR LSG++KEILG S
Sbjct: 69 LKNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTS 113
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 36.7 bits (81), Expect = 0.48
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = +2
Query: 161 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAXATSDWKGLKITVQL 310
V L C GGEVG+ S A + P + K VG+ A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 311 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 403
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_A2XIU1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 168
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 604 SSAVDVINKIMWRPALHQYIQLTVLCPRISFTEPERYR 491
S+ + N+ MWRP+L + +T+ P I T P R R
Sbjct: 125 SATITASNRPMWRPSLTGHPPMTLTAPHIWSTRPSRQR 162
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 32.7 bits (71), Expect = 7.7
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 236 SPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 415
SP ++ DDI D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 416 IKHNGNISLA 445
+++ N+ +A
Sbjct: 595 LEYGSNVIVA 604
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,934,183
Number of Sequences: 1657284
Number of extensions: 13445095
Number of successful extensions: 34227
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34188
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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