Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C17
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 214 2e-55
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 214 2e-55
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 214 2e-55
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 214 2e-55
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 214 2e-55
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 214 3e-55
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 206 4e-53
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 83 3e-32
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 50 7e-06
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 50 7e-06
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 47 5e-05
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 33 0.65
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 8.0
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 8.0
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 8.0
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 214 bits (523), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 214 bits (523), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 214 bits (523), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 214 bits (523), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 214 bits (523), Expect = 2e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 214 bits (522), Expect = 3e-55
Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 5/166 (3%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH- 472
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 473 -XKQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
++++G + L S + V+GR PHD+IDDINSGA+
Sbjct: 153 LARELSGTIKEILGTAQS------VGCNVDGRHPHDIIDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 206 bits (504), Expect = 4e-53
Identities = 104/162 (64%), Positives = 124/162 (76%), Gaps = 1/162 (0%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAG-CNRNCEXHXKQ 481
+LT++NRQAQI VVPSA+A II+ALK+PPRDRKKQKNIKHNGNI+ N + +
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 482 INGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
+ + + + AQ + V+G PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEIPGTAQ--SMGCNVDGHHPHDIIDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 83.0 bits (196), Expect(2) = 3e-32
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Frame = +2
Query: 335 IAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS---LAGCNRNCEXH--XKQINGPVP 499
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + R ++++G +
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 500 FWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGAL 607
L S + V+GR PHD+IDDINSGA+
Sbjct: 98 EILGTAQS------VGCNVDGRHPHDIIDDINSGAV 127
Score = 75.8 bits (178), Expect(2) = 3e-32
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 235
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.0 bits (114), Expect = 7e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 287 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 186
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.0 bits (114), Expect = 7e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -3
Query: 287 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 186
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 47.2 bits (107), Expect = 5e-05
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -3
Query: 287 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 186
PSSH WQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 33.5 bits (73), Expect = 0.65
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 278 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNGNISLAG 448
DWKG+ +T + Q QI ++ A+L IR L EP + RK K I +++
Sbjct: 435 DWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMASLTFGD 494
Query: 449 CNRNCEXHXKQINGPV 496
+ Q NGPV
Sbjct: 495 ILPITQRGNAQANGPV 510
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 143 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 265
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 143 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 265
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 143 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 265
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,037,090
Number of Sequences: 237096
Number of extensions: 2175740
Number of successful extensions: 7941
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7917
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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