SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_C17
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...   204   8e-53
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...   204   8e-53
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...   204   8e-53
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...   204   8e-53
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...   204   8e-53
AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodom...    34   0.14 
BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p pro...    33   0.43 
AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-P...    33   0.43 
AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-P...    33   0.43 
AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-P...    33   0.43 
AF231684-1|AAF61221.1|  413|Drosophila melanogaster outstretched...    31   1.8  
AF072823-1|AAC69620.1|  413|Drosophila melanogaster unpaired pro...    31   1.8  
AE014298-2697|AAF48823.1|  413|Drosophila melanogaster CG5993-PA...    31   1.8  
AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,...    28   9.4  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score =  204 bits (498), Expect = 8e-53
 Identities = 102/163 (62%), Positives = 120/163 (73%)
 Frame = +2

Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202

Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
            LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI              + 
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 262

Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
                    K       S +   V+G+ PHD+ID++N G++ +
Sbjct: 263 MARELKGTCKEVLGTAQS-VGCTVDGKHPHDVIDELNEGSIEV 304



 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
           K +K    +     +D++ IA +M  RSMAR L G+ KE+LG
Sbjct: 235 KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 276


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score =  204 bits (498), Expect = 8e-53
 Identities = 102/163 (62%), Positives = 120/163 (73%)
 Frame = +2

Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60

Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
            LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI              + 
Sbjct: 61  CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 120

Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
                    K       S +   V+G+ PHD+ID++N G++ +
Sbjct: 121 MARELKGTCKEVLGTAQS-VGCTVDGKHPHDVIDELNEGSIEV 162



 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
           K +K    +     +D++ IA +M  RSMAR L G+ KE+LG
Sbjct: 93  KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score =  204 bits (498), Expect = 8e-53
 Identities = 102/163 (62%), Positives = 120/163 (73%)
 Frame = +2

Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60

Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
            LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI              + 
Sbjct: 61  CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 120

Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
                    K       S +   V+G+ PHD+ID++N G++ +
Sbjct: 121 MARELKGTCKEVLGTAQS-VGCTVDGKHPHDVIDELNEGSIEV 162



 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
           K +K    +     +D++ IA +M  RSMAR L G+ KE+LG
Sbjct: 93  KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score =  204 bits (498), Expect = 8e-53
 Identities = 102/163 (62%), Positives = 120/163 (73%)
 Frame = +2

Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60

Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
            LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI              + 
Sbjct: 61  CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 120

Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
                    K       S +   V+G+ PHD+ID++N G++ +
Sbjct: 121 MARELKGTCKEVLGTAQS-VGCTVDGKHPHDVIDELNEGSIEV 162



 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
           K +K    +     +D++ IA +M  RSMAR L G+ KE+LG
Sbjct: 93  KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score =  204 bits (498), Expect = 8e-53
 Identities = 102/163 (62%), Positives = 120/163 (73%)
 Frame = +2

Query: 125 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 304
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 60

Query: 305 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLAGCNRNCEXHXKQI 484
            LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI              + 
Sbjct: 61  CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 120

Query: 485 NGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTI 613
                    K       S +   V+G+ PHD+ID++N G++ +
Sbjct: 121 MARELKGTCKEVLGTAQS-VGCTVDGKHPHDVIDELNEGSIEV 162



 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 402 KSRKISNTTATSPLQDVIGIAXIMXNRSMARYLSGSVKEILG 527
           K +K    +     +D++ IA +M  RSMAR L G+ KE+LG
Sbjct: 93  KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134


>AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodomain
           protein protein.
          Length = 1081

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +2

Query: 476 KQINGPVPFWLSKRDSWAQHSQLDVLVEGRPPHDLIDDINSGALTID 616
           +Q N P+PF L +RD   QH Q    V   P H +  DIN   LT+D
Sbjct: 102 QQTNMPLPFGLLERDR--QHMQHGREVNTSPVHFVSSDINLDGLTVD 146


>BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p
           protein.
          Length = 899

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +2

Query: 236 SPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 415
           SP ++ DDI     D +  K  + L ++NR+AQ        A I     E  R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594

Query: 416 IKHNGNISLA 445
           +++  N+ +A
Sbjct: 595 LEYGSNVIVA 604


>AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-PA,
           isoform A protein.
          Length = 533

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +2

Query: 236 SPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 415
           SP ++ DDI     D +  K  + L ++NR+AQ        A I     E  R++ ++KN
Sbjct: 134 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 192

Query: 416 IKHNGNISLA 445
           +++  N+ +A
Sbjct: 193 LEYGSNVIVA 202


>AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-PC,
           isoform C protein.
          Length = 935

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +2

Query: 236 SPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 415
           SP ++ DDI     D +  K  + L ++NR+AQ        A I     E  R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594

Query: 416 IKHNGNISLA 445
           +++  N+ +A
Sbjct: 595 LEYGSNVIVA 604


>AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-PB,
           isoform B protein.
          Length = 935

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +2

Query: 236 SPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 415
           SP ++ DDI     D +  K  + L ++NR+AQ        A I     E  R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594

Query: 416 IKHNGNISLA 445
           +++  N+ +A
Sbjct: 595 LEYGSNVIVA 604


>AF231684-1|AAF61221.1|  413|Drosophila melanogaster outstretched
           protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -1

Query: 613 NGQSSAVDVINKIMWRPALHQYIQLTVLCPRISFTEPERYRAIDLFXMXFA 461
           + Q SA+D+ N  MW    H Y  L  L P  +      YR +  +   FA
Sbjct: 137 SSQDSAIDIRNMTMWSLHTHNYKFLPKLKPNSTIALKRWYRNMQTYVASFA 187


>AF072823-1|AAC69620.1|  413|Drosophila melanogaster unpaired
           protein protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -1

Query: 613 NGQSSAVDVINKIMWRPALHQYIQLTVLCPRISFTEPERYRAIDLFXMXFA 461
           + Q SA+D+ N  MW    H Y  L  L P  +      YR +  +   FA
Sbjct: 137 SSQDSAIDIRNMTMWSLHTHNYKFLPKLKPNSTIALKRWYRNMQTYVASFA 187


>AE014298-2697|AAF48823.1|  413|Drosophila melanogaster CG5993-PA
           protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -1

Query: 613 NGQSSAVDVINKIMWRPALHQYIQLTVLCPRISFTEPERYRAIDLFXMXFA 461
           + Q SA+D+ N  MW    H Y  L  L P  +      YR +  +   FA
Sbjct: 137 SSQDSAIDIRNMTMWSLHTHNYKFLPKLKPNSTIALKRWYRNMQTYVASFA 187


>AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,
           isoform B protein.
          Length = 778

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +2

Query: 143 PNEIKIVNLRCVGGEVGATSSLAPKI--GPLGLSPKKVGDDIAXATSDWKGLKITVQ 307
           P+E++++ +   G +   TSS++  I  GP G +P  VG  ++  ++  +G  +TVQ
Sbjct: 501 PSEMELL-MCSSGNKKSLTSSVSAGITGGPAGAAPATVGSTLSPHSAHNQGSSLTVQ 556


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,313,953
Number of Sequences: 53049
Number of extensions: 649781
Number of successful extensions: 1578
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -