Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_C14
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.90 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   0.90 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 405  GDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL-ALXVVENM 551
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ AL +  N+
Sbjct: 876  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 925


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 405  GDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL-ALXVVENM 551
            GD T  V+     L+ S+  L  +  HP  I   F+K +Q+ AL +  N+
Sbjct: 877  GDWTGVVLPFPANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNI 926


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 347 NTHLFQNCCSIISYCNFSIGCLNHLI 270
           N +L QNCC +    NF I  + + +
Sbjct: 406 NIYLVQNCCQLFFMTNFGINFILYCV 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,292
Number of Sequences: 2352
Number of extensions: 9074
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)