Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C14
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 194 6e-50
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 194 6e-50
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 143 8e-35
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 143 8e-35
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 143 8e-35
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 126 1e-29
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 126 1e-29
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 121 4e-28
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 121 4e-28
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 118 3e-27
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 116 1e-26
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 116 1e-26
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 116 1e-26
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 102 3e-22
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 102 3e-22
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 95 4e-20
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 60 2e-09
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 52 4e-07
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 194 bits (472), Expect = 6e-50
Identities = 95/129 (73%), Positives = 108/129 (83%)
Frame = +3
Query: 168 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 347
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 348 IHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL 527
IHP AKMLV LS+AQDIEAGDGTT+VVV+AGALLD+A LL KGIHPT IS+ FQ A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 528 ALXVVENMS 554
A +++ MS
Sbjct: 143 AEKILDEMS 151
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 554 TPVDLNNEXXXXXXXXTSLNSKVXPQHSTILAP 652
+PVDL+N+ TSLNSKV QHS +LAP
Sbjct: 152 SPVDLSNDALLNKMATTSLNSKVVSQHSWLLAP 184
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 194 bits (472), Expect = 6e-50
Identities = 95/129 (73%), Positives = 108/129 (83%)
Frame = +3
Query: 168 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 347
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 348 IHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQL 527
IHP AKMLV LS+AQDIEAGDGTT+VVV+AGALLD+A LL KGIHPT IS+ FQ A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 528 ALXVVENMS 554
A +++ MS
Sbjct: 143 AEKILDEMS 151
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 554 TPVDLNNEXXXXXXXXTSLNSKVXPQHSTILAP 652
+PVDL+N+ TSLNSKV QHS +LAP
Sbjct: 152 SPVDLSNDALLNKMATTSLNSKVVSQHSWLLAP 184
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 143 bits (347), Expect = 8e-35
Identities = 68/117 (58%), Positives = 94/117 (80%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++V LS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENMS 554
++QD E GDGTT VVV+AGALL+ A KL+ +GIHP I+DGF A + AL ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSIS 153
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 143 bits (347), Expect = 8e-35
Identities = 68/117 (58%), Positives = 94/117 (80%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++V LS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENMS 554
++QD E GDGTT VVV+AGALL+ A KL+ +GIHP I+DGF A + AL ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSIS 153
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 143 bits (347), Expect = 8e-35
Identities = 68/117 (58%), Positives = 94/117 (80%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++V LS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENMS 554
++QD E GDGTT VVV+AGALL+ A KL+ +GIHP I+DGF A + AL ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSIS 153
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 126 bits (305), Expect = 1e-29
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +3
Query: 156 ILQLYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILK 335
IL L ++ IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 336 QMSVIHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQK 515
Q+ V HPA K+LV L++ QD E GDGTTSVV++A LL A +L+++ +HPT I +G++
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 516 ALQLALXVV-ENMS 554
A + A+ + EN+S
Sbjct: 128 ACKEAVKYISENIS 141
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 126 bits (305), Expect = 1e-29
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +3
Query: 156 ILQLYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILK 335
IL L ++ IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 336 QMSVIHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQK 515
Q+ V HPA K+LV L++ QD E GDGTTSVV++A LL A +L+++ +HPT I +G++
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 516 ALQLALXVV-ENMS 554
A + A+ + EN+S
Sbjct: 128 ACKEAVKYISENIS 141
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 121 bits (292), Expect = 4e-28
Identities = 55/120 (45%), Positives = 83/120 (69%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXL 380
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V +
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENMSLQ 560
+R+QD E GDGTTSVVV+A +L ++ G+HP ++ KA + L + ++ ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 121 bits (292), Expect = 4e-28
Identities = 55/120 (45%), Positives = 83/120 (69%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXL 380
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V +
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENMSLQ 560
+R+QD E GDGTTSVVV+A +L ++ G+HP ++ KA + L + ++ ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 118 bits (285), Expect = 3e-27
Identities = 54/118 (45%), Positives = 82/118 (69%)
Frame = +3
Query: 195 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLV 374
+++ NINA K +AD IRTSLGPR M KM+ G + +TNDG IL++++V HPAAK ++
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMI 83
Query: 375 XLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVEN 548
++R QD E GDGTTSV+++AG ++ A L++ HPT+I +++AL+ + EN
Sbjct: 84 EIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSEN 141
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 116 bits (280), Expect = 1e-26
Identities = 62/143 (43%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 311
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 312 NDGATILKQMSVIHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPT 491
NDGATILK + V +PAAK+LV +S QD E GDGTTSV V+A LL A KL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 492 VISDGFQKALQLALXVVENMSLQ 560
I G+++AL +A ++ S++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIE 144
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 116 bits (280), Expect = 1e-26
Identities = 62/143 (43%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 311
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 312 NDGATILKQMSVIHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPT 491
NDGATILK + V +PAAK+LV +S QD E GDGTTSV V+A LL A KL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 492 VISDGFQKALQLALXVVENMSLQ 560
I G+++AL +A ++ S++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIE 144
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 116 bits (280), Expect = 1e-26
Identities = 62/143 (43%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 311
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 312 NDGATILKQMSVIHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPT 491
NDGATILK + V +PAAK+LV +S QD E GDGTTSV V+A LL A KL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 492 VISDGFQKALQLALXVVENMSLQ 560
I G+++AL +A ++ S++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIE 144
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 102 bits (244), Expect = 3e-22
Identities = 45/113 (39%), Positives = 74/113 (65%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLSR 386
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVE 545
AQD GDGTTS V++ G LL A L+ +G+HP ++++GF+ A L ++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLE 135
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 102 bits (244), Expect = 3e-22
Identities = 45/113 (39%), Positives = 74/113 (65%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLSR 386
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVE 545
AQD GDGTTS V++ G LL A L+ +G+HP ++++GF+ A L ++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLE 135
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/115 (36%), Positives = 75/115 (65%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVXLSR 386
NI A +A IR++ GP GM+KM+ ++ +TND ATILK++ + HPAA++++ +
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATE 90
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKALQLALXVVENM 551
Q+ + GD T +VV++A ALL+ A L+ G+ P ++ G+++A + AL ++ +
Sbjct: 91 MQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTL 145
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Frame = +3
Query: 171 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV- 347
KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 348 ---IHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKA 518
+ AK++ ++ + EAGDGTT V+A A+ + +++G + I G A
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNA 138
Query: 519 LQLALXVVENMSLQWT 566
+++ + ++ +S + T
Sbjct: 139 VEVVVAELKKISKKVT 154
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Frame = +3
Query: 171 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV- 347
KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 348 ---IHPAAKMLVXLSRAQDIEAGDGTTSVVVIAGALLDSAXKLLQKGIHPTVISDGFQKA 518
+ AK++ ++ + EAGDGTT V+ A+ + + I G A
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNA 138
Query: 519 LQLALXVVENMSLQWT 566
+++ + ++ +S + T
Sbjct: 139 VEVVVAELKKISKKVT 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,226,223
Number of Sequences: 27780
Number of extensions: 222340
Number of successful extensions: 563
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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