Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_C12
         (426 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007293-1|AAP35957.1|   51|Homo sapiens ATP synthase, H+ transp...    51   1e-06
BC105811-1|AAI05812.1|   51|Homo sapiens ATP5E protein protein.        51   1e-06
BC003671-1|AAH03671.1|   51|Homo sapiens ATP synthase, H+ transp...    51   1e-06
BC001690-1|AAH01690.1|   51|Homo sapiens ATP synthase, H+ transp...    51   1e-06
AL591024-1|CAH70632.1|   51|Homo sapiens protein ( Human DNA seq...    51   1e-06
AL109840-12|CAC09372.1|   51|Homo sapiens ATP synthase, H+ trans...    51   1e-06
AF052955-1|AAF72736.1|   51|Homo sapiens F1-ATPase epsilon-subun...    51   1e-06

>BT007293-1|AAP35957.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC105811-1|AAI05812.1|   51|Homo sapiens ATP5E protein protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC003671-1|AAH03671.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>BC001690-1|AAH01690.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>AL591024-1|CAH70632.1|   51|Homo sapiens protein ( Human DNA
           sequence from clone RP11-153M24 on chromosome 13
           Contains a novel gene similar to ATP synthase (H+
           transporting, mitochondrialnase, an).
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AKV+R +LK EF+A A K   + V++
Sbjct: 5   WRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI 45


>AL109840-12|CAC09372.1|   51|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, epsilon subunit
           protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


>AF052955-1|AAF72736.1|   51|Homo sapiens F1-ATPase epsilon-subunit
           protein.
          Length = 51

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 96  WRQAGLTYINYSNIAAKVLRRSLKQEFRAXALKRDESHVRV 218
           WRQAGL+YI YS I AK +R +LK EF+A A K   S+V++
Sbjct: 5   WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,091,134
Number of Sequences: 237096
Number of extensions: 716129
Number of successful extensions: 1366
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)