Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C09
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 5e-26
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 114 5e-26
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 114 5e-26
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 101 7e-22
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 74 9e-14
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 44 1e-04
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 36 0.022
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 35 0.067
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 34 0.088
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.35
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 31 0.62
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 30 1.4
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 5.8
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 28 7.6
SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48) 28 7.6
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 192 bits (469), Expect = 2e-49
Identities = 95/136 (69%), Positives = 100/136 (73%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 266
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
Query: 267 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYXVDENGKIHRLRRECTGEQCGAGVFMAV 446
NY+TP LAVL++Y VDENGKI RLRREC E CGAGVFMA
Sbjct: 75 GGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSESCGAGVFMAS 134
Query: 447 MEDRHYCGKCHSTMVF 494
DR YCGKC T VF
Sbjct: 135 HFDRQYCGKCCLTYVF 150
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 381 MQIFVKTLTGKTITL 395
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 457 MQIFVKTLTGKTITL 471
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 114 bits (275), Expect = 5e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/55 (58%), Positives = 44/55 (80%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 251
L VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL
Sbjct: 90 LDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHL 144
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 101 bits (241), Expect = 7e-22
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 233
L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 93 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITL 88
MQIFVKTLTGKTITL
Sbjct: 79 MQIFVKTLTGKTITL 93
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 150 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
IPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +3
Query: 99 PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 254
P TI VK I+ K G P +QQRL+F G+ L D T I +TLHL+
Sbjct: 90 PKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQ---DKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 239
+++ +T+ +K KI+ K+ P +LI+AGK L D L +YNI ++S
Sbjct: 81 VEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 141 KEGIPPNQQRLIFAGKQLEDGRTLSDYN 224
+EGIP +QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 120 VKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 233
+K++I+ K GIP + QRL F K+L D TL+ N+++
Sbjct: 32 LKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 233
LQ+ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 50 LQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 147 GIPPNQQRLIFAGKQLEDGRTLSDYN 224
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 251
T+ ++K + +K G+ + RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 87 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTLHLV 254
L V +EN +A ++ + G+P ++ L G QL D +TL+ Y++++ + +V
Sbjct: 15 LDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYSVKENDVILMV 71
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 68 TGKTITLAGRAVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWTYPLGLQY 226
T + + + Y +E E + RQR +S E D+C K R+T Y
Sbjct: 29 TDDQLRIEENSTEYTQESEGLDERQRARGKKSFECDICGKCFSRFTITTKYNY 81
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 372 ENGKIHRLRRECTGEQC 422
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 467 AVVTVLHHRHEHSGA 423
A++TV+HHRH H A
Sbjct: 525 AIITVIHHRHHHHPA 539
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 140 QRGNPSQSTEVDLCWKAAGRWTYPLGLQYPEGIHPPPGVEAS 265
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 100 RQIPSRM*KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTIS 228
+QIP M L ++ + E+ P+N +LL+ SW + + + T S
Sbjct: 123 KQIPP-MKDLVYEPREENFPLNSNPALLKVSWTVGIDNWVTAS 164
>SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48)
Length = 947
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 31 KESEDANFRKDPHGQDHHPCRSS 99
++S DA +K PHGQD+ P R +
Sbjct: 617 RKSSDALNKKAPHGQDNRPKRKN 639
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,848,989
Number of Sequences: 59808
Number of extensions: 409402
Number of successful extensions: 1017
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -