Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C08
(441 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 122 3e-27
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 98 8e-20
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 91 1e-17
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 89 4e-17
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 83 3e-15
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 83 3e-15
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 75 9e-13
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 75 9e-13
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 70 3e-11
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 62 5e-09
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 56 4e-07
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 54 2e-06
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 42 0.004
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 42 0.006
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 42 0.008
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 39 0.055
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 35 0.67
UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11; Thermoprot... 35 0.67
UniRef50_Q9Y9T9 Cluster: 30S ribosomal protein S30; n=2; Thermop... 34 1.2
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 34 1.6
UniRef50_UPI0000DA48E0 Cluster: PREDICTED: similar to CG11585-PA... 32 4.7
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 32 4.7
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 122 bits (294), Expect = 3e-27
Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Frame = +2
Query: 41 MQLHIXGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXX-- 214
MQ+ + G + H ++V+ + + Q+K + + ED LS G PL
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 215 XXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQ 394
V ++GGKVHGSLARAGKV+GQTPKVE Q+K TGRAKR + YNRRFVNVV
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVA 120
Query: 395 TFGRRRGPNSNS 430
FGRRRGPNSN+
Sbjct: 121 QFGRRRGPNSNA 132
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 97.9 bits (233), Expect = 8e-20
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2
Query: 254 KVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRRGPNSNS 430
KVHGSLARAGKV+GQTPKV KQ+K TGRAKR + YNRRFVNVV TFG+++GPN+NS
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 91.1 bits (216), Expect = 1e-17
Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Frame = +2
Query: 41 MQLHIXG--QSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXX 214
MQ+ + G +TH LDV+ ++ IK I E+ ++S G+ +
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGA-----GEEFSISY-GSKVLSEELTLGEC 54
Query: 215 XXXXXXTVP----LLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFV 382
T+ LLGGKVHGSLARAGKV+ QTPKV+KQ K GRA R + Y RR+V
Sbjct: 55 QIESLSTLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYV 114
Query: 383 NVVQTFGRRRGPNSNS 430
NV G++RGPNSNS
Sbjct: 115 NVASGPGKKRGPNSNS 130
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 89.0 bits (211), Expect = 4e-17
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = +2
Query: 254 KVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRRGPNSNS 430
KVHGSLARAGKV+GQTP V+K ++ GRAKR I YNRRFVNVV TFG+++G N+NS
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 83.0 bits (196), Expect = 3e-15
Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 50 HIXGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXX---XXXX 220
H Q H L V GQE + QIK + +L +D L L G PL
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 221 XXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTF 400
+LGGKVHGSL AGKV+GQTPKV+K+ K G+AKR YN FV VV
Sbjct: 61 TLEVVGRMLGGKVHGSLDCAGKVRGQTPKVDKESK--RRWGQAKRGTYYNPCFVKVVPHL 118
Query: 401 GRRRGPNSNS 430
+++G N +S
Sbjct: 119 KKKKGTNVSS 128
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 83.0 bits (196), Expect = 3e-15
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRRGPNSN 427
GKVHGSLARAGKV+GQTPKV KQ K GRA + + +NRRFV V FG++RGPNS+
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 74.5 bits (175), Expect = 9e-13
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRR 412
GKVHGSLARAGKVK TPKVEKQ+K GRA + + Y RRFVNV T G+R+
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRRFVNVTMTGGKRK 55
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 74.5 bits (175), Expect = 9e-13
Identities = 37/60 (61%), Positives = 42/60 (70%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRRGPNSNS 430
GKVHGSLARAGKVK QTPKVEKQ+K GRA + + Y RRFVNV G +R N +S
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPSS 61
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 69.7 bits (163), Expect = 3e-11
Identities = 47/120 (39%), Positives = 60/120 (50%)
Frame = +2
Query: 71 HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXXXXXXXTVPLLG 250
H L V GQE + Q+K + +L + ED + L G PL
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDEATL---------------- 46
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQTFGRRRGPNSNS 430
G+ G A GKV+GQ PKV KQ+K TGRAKR I Y+ FV VV TFG ++ N+NS
Sbjct: 47 GQC-GVEAPHGKVRGQAPKVAKQEKQKKKTGRAKRWIQYHWHFVTVVPTFG-KKDLNTNS 104
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 62.1 bits (144), Expect = 5e-09
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVN 385
GK+HGSLARAGKVK QTPKV KQ+K GRA + + Y RRF++
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLS 46
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 55.6 bits (128), Expect = 4e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQ-QKXXXXTGRAKRTIXYNRRFVNVVQTFG----RRRG 415
GK+HG+LA+AGKV+ QTPK+EKQ ++ GRA + I +NRRF + +R+G
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRFGSAAAAGAGPQQKRKG 61
Query: 416 PN 421
PN
Sbjct: 62 PN 63
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQK-XXXXTGRAKRTIXYNRRFV-NVVQTF-GRRRGPN 421
G++HG+LA+AGKV+ QTPKVEK+ K GR+ + I YNRR+ +++ T +R+ PN
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVEKKDKPRKTPKGRSYKRILYNRRYAPHILATDPKKRKSPN 61
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAK 352
GKVHGSL RAGKV+ QT + K K +GRA+
Sbjct: 2 GKVHGSLTRAGKVRNQTKFIAKSDKKVKNSGRAR 35
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 251 GKVHGSLARAGKVKGQTPKVEKQQ--KXXXXTGRAKRTIXYNRRFV 382
GKVHG L RAGKV+ QT K EK K +GRA Y++R V
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPEKVDTGKKKFPSGRAYLRYLYSKRMV 47
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 41 MQLHIXGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPL 184
MQL + Q H L+V GQE++ QIK + +L ++ ED + L G L
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAGMTL 48
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 38.7 bits (86), Expect = 0.055
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 260 HGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFV 382
HGSL +AGKV+ QTPK+E ++K R+ Y +R V
Sbjct: 4 HGSLTKAGKVRSQTPKIEGRKKTGTNASVQNRS-NYRKRLV 43
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 35.1 bits (77), Expect = 0.67
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Frame = +2
Query: 35 TTMQLHIXGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXX---X 205
T +QL + H L+V G E+ IK + +L ED + L G+PL
Sbjct: 15 TDVQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSPLPGEAILGQCG 74
Query: 206 XXXXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVE 313
+LGG G+ R G ++ P E
Sbjct: 75 VEALATLEMVGRMLGGSGGGARMRTGALRQPPPLPE 110
>UniRef50_Q8ZV51 Cluster: Ribosomal protein S30; n=11;
Thermoprotei|Rep: Ribosomal protein S30 - Pyrobaculum
aerophilum
Length = 55
Score = 35.1 bits (77), Expect = 0.67
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 260 HGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRR 376
HGSL +AGKV+ QTPK+ + + T R + Y RR
Sbjct: 4 HGSLTKAGKVRNQTPKIPAKPR-KNLTPRRRNIRNYKRR 41
>UniRef50_Q9Y9T9 Cluster: 30S ribosomal protein S30; n=2;
Thermoprotei|Rep: 30S ribosomal protein S30 - Aeropyrum
pernix
Length = 50
Score = 34.3 bits (75), Expect = 1.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 260 HGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNV 388
HGSL +AGKV+ QTP++ +QK R K + Y R V
Sbjct: 4 HGSLTKAGKVRKQTPRLPAKQK-KNYPPRLKNRLKYQVRIEKV 45
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 33.9 bits (74), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 50 HIXGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPL 184
++ + H L+V G E++ Q K + +L + ED + L G+PL
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPL 48
>UniRef50_UPI0000DA48E0 Cluster: PREDICTED: similar to CG11585-PA;
n=1; Rattus norvegicus|Rep: PREDICTED: similar to
CG11585-PA - Rattus norvegicus
Length = 293
Score = 32.3 bits (70), Expect = 4.7
Identities = 22/95 (23%), Positives = 31/95 (32%)
Frame = -1
Query: 294 PLTLPARAKDPCTLPPSNGTVRXXXXXXXXETRHESCKGAPHNDRVRSSSPTAARVRMRS 115
PLT P P T PP G + + G + + P+A S
Sbjct: 108 PLTTPPPQPVPVTAPPPQGYANQSAPCTACASYYSPITGYAYPSAPCYAYPSAPCTACAS 167
Query: 114 LI*PMDSWPLTSSTCVDCPXICNCIVVKSLSTKPD 10
+ TS+ C C C+ I + T PD
Sbjct: 168 FCSRTTDYAYTSAPCTACASYCSPITGYANQTAPD 202
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 91 PGVHWSDQGTHSYSCCSWR*RPYSIIMWS 177
PG+HW++Q YS CS P I MW+
Sbjct: 378 PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,917,981
Number of Sequences: 1657284
Number of extensions: 6375263
Number of successful extensions: 15353
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15348
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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