Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C08
(441 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071683-1|AAL49305.2| 147|Drosophila melanogaster RH08962p pro... 126 1e-29
AE014297-2878|AAN13838.1| 132|Drosophila melanogaster CG15697-P... 126 1e-29
AE014297-2877|AAF55815.1| 132|Drosophila melanogaster CG15697-P... 126 1e-29
BT024260-1|ABC86322.1| 210|Drosophila melanogaster IP15833p pro... 28 6.5
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 28 6.5
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 28 6.5
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 28 6.5
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 28 6.5
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 28 6.5
>AY071683-1|AAL49305.2| 147|Drosophila melanogaster RH08962p
protein.
Length = 147
Score = 126 bits (304), Expect = 1e-29
Identities = 66/131 (50%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 41 MQLHIXGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 217
MQL + G T L+V+ +I +K ++ + E+ +L G L
Sbjct: 16 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75
Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQT 397
+P+LGGKVHGSLARAGKVKGQTPKVEKQ+K TGRAKR I YNRRFVN VQ
Sbjct: 76 FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 135
Query: 398 FGRRRGPNSNS 430
FGRRRGPN+NS
Sbjct: 136 FGRRRGPNANS 146
>AE014297-2878|AAN13838.1| 132|Drosophila melanogaster CG15697-PB,
isoform B protein.
Length = 132
Score = 126 bits (304), Expect = 1e-29
Identities = 66/131 (50%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 41 MQLHIXGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 217
MQL + G T L+V+ +I +K ++ + E+ +L G L
Sbjct: 1 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60
Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQT 397
+P+LGGKVHGSLARAGKVKGQTPKVEKQ+K TGRAKR I YNRRFVN VQ
Sbjct: 61 FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120
Query: 398 FGRRRGPNSNS 430
FGRRRGPN+NS
Sbjct: 121 FGRRRGPNANS 131
>AE014297-2877|AAF55815.1| 132|Drosophila melanogaster CG15697-PA,
isoform A protein.
Length = 132
Score = 126 bits (304), Expect = 1e-29
Identities = 66/131 (50%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 41 MQLHIXGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 217
MQL + G T L+V+ +I +K ++ + E+ +L G L
Sbjct: 1 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60
Query: 218 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIXYNRRFVNVVQT 397
+P+LGGKVHGSLARAGKVKGQTPKVEKQ+K TGRAKR I YNRRFVN VQ
Sbjct: 61 FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120
Query: 398 FGRRRGPNSNS 430
FGRRRGPN+NS
Sbjct: 121 FGRRRGPNANS 131
>BT024260-1|ABC86322.1| 210|Drosophila melanogaster IP15833p
protein.
Length = 210
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 132 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 166
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p protein.
Length = 1022
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 948 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 982
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 2085 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 2119
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 2085 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 2119
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 2085 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 2119
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 8 LSGLVDNDFTTMQLHIXGQSTHVLDVNGQESIGQI 112
L GLV NDFT QL + + QES G++
Sbjct: 2065 LQGLVGNDFTAQQLQLVQTQVKQQLMKAQESNGKL 2099
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,022
Number of Sequences: 53049
Number of extensions: 318166
Number of successful extensions: 738
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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