Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C07
(426 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 95 7e-19
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 95 7e-19
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 85 6e-16
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 77 1e-13
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 50 2e-05
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 45 8e-04
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 44 0.002
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 42 0.005
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 41 0.009
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 40 0.028
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.15
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 37 0.20
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 35 0.61
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 35 0.81
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 35 0.81
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 33 2.5
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 32 4.3
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 32 5.7
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 31 7.5
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 94.7 bits (225), Expect = 7e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 2.5
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 94.7 bits (225), Expect = 7e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 2.5
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 85.0 bits (201), Expect = 6e-16
Identities = 41/79 (51%), Positives = 49/79 (62%)
Frame = +1
Query: 49 LDLLHPSPALGXXXXXXXXXSCHILTLISWMLSAXGCYKITTXFSHAQRVVVCAGCSTIL 228
+DLL+PSPA + GC+ ITT FSHAQ VV+C GC+T+L
Sbjct: 5 VDLLNPSPA-SEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVL 63
Query: 229 CQPTGGRATLTEGCSFRRK 285
CQPTGG+A LTEGCSFRRK
Sbjct: 64 CQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 77.4 bits (182), Expect = 1e-13
Identities = 33/44 (75%), Positives = 35/44 (79%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRK 285
GCY I T FSHAQR V C GC TILC PTGG+A LTEGCSFR+K
Sbjct: 2018 GCYAIKTIFSHAQRPVECDGCRTILCTPTGGKARLTEGCSFRKK 2061
Score = 34.3 bits (75), Expect = 1.1
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 39 PLAT*FVASFPCARRGGNISLSG*LPHPNSYFMDVKCPG 155
PLA F+ P + + L + PNSYFMDVKCPG
Sbjct: 1981 PLAKDFLHPSPAEEKRKH-KLKRLVQKPNSYFMDVKCPG 2018
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 157 CYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRR 282
C FSH+Q +VC C+ LC PTGG+A L +GC F R
Sbjct: 39 CKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLIKGCKFSR 80
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 44.8 bits (101), Expect = 8e-04
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -1
Query: 291 MLFSSKRTSFS*CSTATSGLTKDR*ASSADHHSLCVTKXCCNLV 160
MLFSSKR +FS AT LT+DR S +++LC+T+ C+LV
Sbjct: 1 MLFSSKRATFSESRPATCWLTQDRRTSCTHYYTLCMTEHRCDLV 44
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 43.6 bits (98), Expect = 0.002
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRR 282
GC T +SH+Q + C GC I+ +GGRA ++ C F++
Sbjct: 37 GCRHTTCCYSHSQTNISCPGCGDIILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 41.9 bits (94), Expect = 0.005
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPT 240
GCYK+ FS VV+ GCST+ CQPT
Sbjct: 226 GCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 41.1 bits (92), Expect = 0.009
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1
Query: 142 LSAXGCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFR 279
L C +TT FSH+ V C C T L PTGGR L + R
Sbjct: 36 LRCPSCTGLTTAFSHSNVPVFCKNCQTPLATPTGGRILLADQVEIR 81
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 39.5 bits (88), Expect = 0.028
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 142 LSAXGCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLT 261
+ GC I +SHA V C GC++ + PTGG+ T
Sbjct: 33 IKCAGCQDIVVVYSHANTPVFCPGCTSQISIPTGGKCAFT 72
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 37.1 bits (82), Expect = 0.15
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 214 CSTILCQPTGGRATLTEGCSFRRK 285
CS ILC+PTGG+ + GC+F+ K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 36.7 bits (81), Expect = 0.20
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +1
Query: 52 DLLHPSPALGXXXXXXXXXSCHILTLISWMLSAXGCYKITTXFSHAQRVVVCAGCSTILC 231
DLLHPSP + + GCYKITT FSHAQ VV+ A T+ C
Sbjct: 6 DLLHPSPEKKRKHKKKHLVQSPNSYFMD--MKCPGCYKITTVFSHAQTVVLKA--QTLRC 61
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 35.1 bits (77), Expect = 0.61
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 157 CYKITTXFSHAQRVVVCAGCSTILCQPTGGR 249
C KI FSH+ C CST+L +P+GG+
Sbjct: 43 CKKINIIFSHSVFWKTCVDCSTLLTRPSGGK 73
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 34.7 bits (76), Expect = 0.81
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 157 CYKITTXFSHAQRVVVCAGCSTILCQPTGGRATL 258
C FSHA VV C C +L PTGG+A L
Sbjct: 25 CGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 34.7 bits (76), Expect = 0.81
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 157 CYKITTXFSHAQRVVVCAGCSTILCQPTGGRATL 258
C T F A V CA C T L +PTGG A L
Sbjct: 13 CENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 33.1 bits (72), Expect = 2.5
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 136 WMLSAXGCYKITTXFSHAQRVVVCAGCSTILCQPTGGRA 252
+ L C F A VV CA C T L PTGG A
Sbjct: 6 YQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 31.9 bits (69), Expect = 5.7
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 120 PNSYFMDVKCPGLLQDYNXF*SRTESGGL--RWMLN 221
PNSYFMDV+CPG + F SR ++ L +MLN
Sbjct: 194 PNSYFMDVQCPGRYEITTVF-SRAQTVVLTITYMLN 228
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 31.5 bits (68), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 142 LSAXGCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATL 258
+ C T +S A+ V C C +L +P GG+A L
Sbjct: 18 IECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,432,604
Number of Sequences: 1657284
Number of extensions: 6622893
Number of successful extensions: 11408
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11404
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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