Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C07
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 95 1e-19
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 95 1e-19
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 95 1e-19
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 95 1e-19
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 95 1e-19
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 95 1e-19
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 95 1e-19
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 79 5e-15
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 71 1e-12
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 33 0.40
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 94.7 bits (225), Expect = 1e-19
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSFRRKQH 291
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEGCSFRRKQH
Sbjct: 39 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 79.4 bits (187), Expect = 5e-15
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLTEGCSF 276
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LTEG SF
Sbjct: 55 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 44 PNSYFMDVKCPG 55
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 71.3 bits (167), Expect = 1e-12
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 154 GCYKITTXFSHAQRVVVCAGCSTILCQPTGGRATLT 261
GCYKITT FSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 34 GCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 23 PNSYFMDVKCPG 34
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 33.1 bits (72), Expect = 0.40
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 120 PNSYFMDVKCPG 155
PNSYFMDVKCPG
Sbjct: 28 PNSYFMDVKCPG 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,620,465
Number of Sequences: 237096
Number of extensions: 1071960
Number of successful extensions: 1634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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