Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C02
(644 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 195 3e-52
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 195 3e-52
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.4
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 195 bits (475), Expect = 3e-52
Identities = 89/104 (85%), Positives = 98/104 (94%)
Frame = +1
Query: 220 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 399
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 400 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 531
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG 104
Score = 46.8 bits (106), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 585 GGAAGATSLCFVYPLDFART 644
GGAAGATSLCFVYPLDFART
Sbjct: 122 GGAAGATSLCFVYPLDFART 141
Score = 37.5 bits (83), Expect = 1e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 530 GVDKKTQFWRYFAGNLASG 586
GVDK TQF RYF GNLASG
Sbjct: 104 GVDKNTQFLRYFVGNLASG 122
Score = 28.7 bits (61), Expect = 0.051
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 247 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 426
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 427 LSFWRGNFANVIRYFPTQALNFAFKD 504
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 307 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 465
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 195 bits (475), Expect = 3e-52
Identities = 89/104 (85%), Positives = 98/104 (94%)
Frame = +1
Query: 220 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 399
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 400 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 531
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG 104
Score = 46.8 bits (106), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 585 GGAAGATSLCFVYPLDFART 644
GGAAGATSLCFVYPLDFART
Sbjct: 122 GGAAGATSLCFVYPLDFART 141
Score = 37.5 bits (83), Expect = 1e-04
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 530 GVDKKTQFWRYFAGNLASG 586
GVDK TQF RYF GNLASG
Sbjct: 104 GVDKNTQFLRYFVGNLASG 122
Score = 28.7 bits (61), Expect = 0.051
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 247 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 426
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 427 LSFWRGNFANVIRYFPTQALNFAFKD 504
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 307 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 465
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 273 TASQEVLSERDRIGEVRHFVRLCDLQLGEYVEVG 172
TA + L ++ +I ++ +VR DL E+ +VG
Sbjct: 27 TADMDFLHKQKKIFDLLLYVRQADLSDAEWYDVG 60
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 273 TASQEVLSERDRIGEVRHFVRLCDLQLGEYVEVG 172
TA + L ++ +I ++ +VR DL E+ +VG
Sbjct: 27 TADMDFLHKQKKIFDLLLYVRQADLSDAEWYDVG 60
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 487 NFAFKDKYKQVFLGGC 534
NF KDK K+V + GC
Sbjct: 594 NFDIKDKNKKVNVAGC 609
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -2
Query: 610 REVAPAAPPGGQITSEVTPELR 545
++++PA P G + + TPE++
Sbjct: 272 KKLSPATPKGSKCSMITTPEIK 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,561
Number of Sequences: 438
Number of extensions: 3085
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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