Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_C01
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   137   2e-34
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   3.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   4.3  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  137 bits (332), Expect = 2e-34
 Identities = 63/106 (59%), Positives = 82/106 (77%)
 Frame = +1

Query: 43  KRFRNRPPLFLNRKGGMKRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFTGNVSIRGRI 222
           + F+ +  + LNRK   ++K +R H ++GLGFKTP EAI GTYIDKKCPFTG++SIRGRI
Sbjct: 8   RAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRI 67

Query: 223 LTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
           LTGVV+K  +   + IRRDYL ++ KY+ F KR+RNM +HLSPCFR
Sbjct: 68  LTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFR 111



 Score = 52.0 bits (119), Expect = 1e-08
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 365 VEIGDIVTIGECRPLSKTVRFNVLK 439
           VE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 113 VEAGDIVTLGECRPLSKTVRFNVLK 137


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 51  QKQATAFPEQERWHEEEGHASP*ECWFRLQNSXRGD*GYLH 173
           ++ AT+ P          H  P EC   + +S     GYLH
Sbjct: 64  REHATSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLH 104


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 228  GEDAAADRNVASEGTLLVNVGT 163
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 61  PPLFLNRKGGMKRKDMRHHKNVGLGFKT 144
           PP   +R G + R D++ HK +  G  T
Sbjct: 134 PPTREHRNGQITRYDVQFHKKIDHGLGT 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,413
Number of Sequences: 2352
Number of extensions: 9698
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)