Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_C01
(496 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 169 6e-42
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 169 6e-42
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 169 6e-42
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 169 6e-42
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 82 9e-16
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 3.8
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 30 5.1
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 29 8.9
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 29 8.9
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 169 bits (410), Expect = 6e-42
Identities = 79/115 (68%), Positives = 93/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 31 IRQRKRFRNRPPLFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIEGTYIDKKCPFT 195
I+ + ++ +P +F N+K + K K R++KN+GLGFKTP EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 196 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
GNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 82.2 bits (194), Expect = 9e-16
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +1
Query: 232 VVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 360
VV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 43
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 365 VEIGDIVTIGECRPLSKTVRFNVLKV 442
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 45 VQIGDIVTVGECRPLSKTVRFNVLKV 70
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 3.8
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -2
Query: 384 TISPISTCPEARRQMYGHVPVPFXEPIVFG*VVKVIAAD-HDSSXHXHLLNDAGEDAAAD 208
T + + T EA+ M +P P V G V ++ + ++S +L + + D
Sbjct: 11181 TTTSLVTHSEAK--MISAIPTLAVSPTVQGLVTSLVTSSGSETSAFSNLTVASSQPETID 11238
Query: 207 RNVASEGTLLVNV-GTLNRLXGSFEA*TNILMVTHVLPLHATFPVQEKRWPVSE 49
VA GT +V TL G E TNI +VTH +T P R+ SE
Sbjct: 11239 SWVAHPGTEASSVVPTLTVSTG--EPFTNISLVTHPAESSSTLPRTTSRFSHSE 11290
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 29.9 bits (64), Expect = 5.1
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -2
Query: 384 TISPISTCPEARRQMYGHVPVPFXEPIVFG*VVKVIAAD-HDSSXHXHLLNDAGEDAAAD 208
T + + T EA+ M +P P V G V ++ + ++S +L + + D
Sbjct: 2885 TTTSLVTHSEAK--MISAIPTLGVSPTVQGLVTSLVTSSGSETSAFSNLTVASSQPETID 2942
Query: 207 RNVASEGTLLVNV-GTLNRLXGSFEA*TNILMVTHVLPLHATFPVQEKRWPVSE 49
VA GT +V TL G E TNI +VTH +T P R+ SE
Sbjct: 2943 SWVAHPGTEASSVVPTLTVSTG--EPFTNISLVTHPAESSSTLPRTTSRFSHSE 2994
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 29.1 bits (62), Expect = 8.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 408 KGLHSPIVTISPISTCPEARRQ 343
KG+H P + I+P+ST P R+
Sbjct: 126 KGIHGPFLVIAPLSTIPNWERE 147
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 29.1 bits (62), Expect = 8.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 408 KGLHSPIVTISPISTCPEARRQ 343
KG+H P + I+P+ST P R+
Sbjct: 251 KGIHGPFLVIAPLSTIPNWERE 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,959,261
Number of Sequences: 237096
Number of extensions: 1402441
Number of successful extensions: 6257
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6248
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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