Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B21
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   5.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 355 EKTGVLILNELCKVTARHGYHGGQYFCQGL*GF 453
           E  G  +L  +C   A  G+H G + C+G  GF
Sbjct: 59  EFDGTTVLCRVCGDKAS-GFHYGVHSCEGCKGF 90


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 ISTPVFSVLSYLSACNS 324
           I   VFSVL +L  CNS
Sbjct: 39  IHPTVFSVLFWLGYCNS 55


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 374 ISTPVFSVLSYLSACNS 324
           I   VFSVL +L  CNS
Sbjct: 487 IHPTVFSVLFWLGYCNS 503


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 479 VRTMGCIRVDKITEYLCEPLTKC 547
           +   G I ++K+T Y+   + KC
Sbjct: 412 IHIKGVISLNKLTSYVISGIVKC 434


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +1

Query: 409 GYHGGQYFCQGL*GF--KSI--DSSFGCTD 486
           G H G Y C+G  GF  +++  D S+ C +
Sbjct: 119 GKHYGVYSCEGCKGFFKRTVRKDLSYACRE 148


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +1

Query: 409 GYHGGQYFCQGL*GF--KSI--DSSFGCTD 486
           G H G Y C+G  GF  +++  D S+ C +
Sbjct: 119 GKHYGVYSCEGCKGFFKRTVRKDLSYACRE 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,668
Number of Sequences: 438
Number of extensions: 2993
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)