Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B18
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P34335 Cluster: Probable phosphorylase b kinase regulat...    33   7.1  
UniRef50_A7S901 Cluster: Predicted protein; n=1; Nematostella ve...    32   9.4  

>UniRef50_P34335 Cluster: Probable phosphorylase b kinase regulatory
            subunit alpha; n=2; Caenorhabditis|Rep: Probable
            phosphorylase b kinase regulatory subunit alpha -
            Caenorhabditis elegans
          Length = 1226

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -2

Query: 584  KKLYTKNVLTKQELAFQAPQAS----KILNKSNNRDTIM*DM*YTIIVYVTNMSRSEPKI 417
            +K  T  + +K+E     P+ +    KI+N++   D     +   IIVY+ ++ R+EPK+
Sbjct: 872  QKQITVGIASKKEEVITCPKTNEELEKIMNRAYGDDANSFTLAQEIIVYLGSLVRTEPKL 931

Query: 416  FSRFWKSR 393
            F   ++ R
Sbjct: 932  FLEMFRLR 939


>UniRef50_A7S901 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 238

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 526 CGAWKANSCLVSTFFVYSFFHLFLTI 603
           CGAWK N C++  FF +    L L I
Sbjct: 73  CGAWKENKCMLICFFAFLLLLLILEI 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,998,692
Number of Sequences: 1657284
Number of extensions: 8583874
Number of successful extensions: 19870
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19866
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)