Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B17
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p pro...    77   2e-14
AE014297-4657|AAF57081.1|  159|Drosophila melanogaster CG11314-P...    77   2e-14
AY071674-1|AAL49296.1|  157|Drosophila melanogaster RH04252p pro...    74   2e-13
AE014297-4659|AAF57082.1|  157|Drosophila melanogaster CG11315-P...    74   2e-13
BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p pro...    47   3e-05
AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p pro...    47   3e-05
AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA ...    47   3e-05
AY084159-1|AAL89897.1|  159|Drosophila melanogaster RE36503p pro...    46   6e-05
AE014297-1792|AAN13595.1|  159|Drosophila melanogaster CG3153-PB...    46   6e-05
AE014297-1791|AAF55013.1|  159|Drosophila melanogaster CG3153-PA...    46   6e-05
AY075563-1|AAL68370.1|  134|Drosophila melanogaster RH68460p pro...    44   2e-04
AE014297-4658|AAN14257.1|  130|Drosophila melanogaster CG11315-P...    44   2e-04
AE014297-1082|AAF54489.1|  165|Drosophila melanogaster CG3934-PA...    33   0.25 

>BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p
           protein.
          Length = 168

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPC---VNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           VV    C +     CT+ +VR+ PC   +N+  C++++  N+++SFDFTP F    L   
Sbjct: 34  VVNFEPCPD-SVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTLVAS 92

Query: 277 LFGLKN-GAEIPFDALYNADACTLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWN 453
           L   K+   E+P   L +A AC  T CP  +G  QT    + I  K P   +  +W L +
Sbjct: 93  LGWAKSENVELPLLTLDSA-ACKYTPCPVRSGVKQTYTTLVPIEAKFPLSPYTIRWALKD 151

Query: 454 EXNESXMCCYRTNVRLV 504
             ++   CC+  ++++V
Sbjct: 152 PVSQK-RCCFTIDIKVV 167


>AE014297-4657|AAF57081.1|  159|Drosophila melanogaster CG11314-PA
           protein.
          Length = 159

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPC---VNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           VV    C +     CT+ +VR+ PC   +N+  C++++  N+++SFDFTP F    L   
Sbjct: 25  VVNFEPCPD-SVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTLVAS 83

Query: 277 LFGLKN-GAEIPFDALYNADACTLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWN 453
           L   K+   E+P   L +A AC  T CP  +G  QT    + I  K P   +  +W L +
Sbjct: 84  LGWAKSENVELPLLTLDSA-ACKYTPCPVRSGVKQTYTTLVPIEAKFPLSPYTIRWALKD 142

Query: 454 EXNESXMCCYRTNVRLV 504
             ++   CC+  ++++V
Sbjct: 143 PVSQK-RCCFTIDIKVV 158


>AY071674-1|AAL49296.1|  157|Drosophila melanogaster RH04252p
           protein.
          Length = 157

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           +V  + C +    +C++++VR+ PC  +     CH+++     +SFDFTP F    L   
Sbjct: 23  IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVAS 81

Query: 277 LFGLKN-GAEIPFDALYNADACTLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWN 453
           L   K+   E+P   + + +AC  T+CP  +G TQT   ++    + P   +  +W L +
Sbjct: 82  LGWAKSENVELPLLTM-DQEACKYTTCPVRSGVTQTYTNNMPADARFPLSPYTIRWALKD 140

Query: 454 EXNESXMCCYRTNVRLV 504
             ++   CC+  ++++V
Sbjct: 141 PVSQK-RCCFTIDIKVV 156


>AE014297-4659|AAF57082.1|  157|Drosophila melanogaster CG11315-PA,
           isoform A protein.
          Length = 157

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           +V  + C +    +C++++VR+ PC  +     CH+++     +SFDFTP F    L   
Sbjct: 23  IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVAS 81

Query: 277 LFGLKN-GAEIPFDALYNADACTLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWN 453
           L   K+   E+P   + + +AC  T+CP  +G TQT   ++    + P   +  +W L +
Sbjct: 82  LGWAKSENVELPLLTM-DQEACKYTTCPVRSGVTQTYTNNMPADARFPLSPYTIRWALKD 140

Query: 454 EXNESXMCCYRTNVRLV 504
             ++   CC+  ++++V
Sbjct: 141 PVSQK-RCCFTIDIKVV 156


>BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p
           protein.
          Length = 148

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
 Frame = +1

Query: 163 VRIDPCVNSRL-CHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPFDALYNADAC 339
           V I+ C  ++  C LK+      S DF      T +KT + G   G E+PF  L N DAC
Sbjct: 34  VAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVKTVVHGKVLGIEMPF-PLANPDAC 92

Query: 340 TLT--SCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNEXNESXMC 477
             +   CP E  ++     +L + +  P  +   KW+L ++     +C
Sbjct: 93  VDSGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQDGADIIC 140


>AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p
           protein.
          Length = 148

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
 Frame = +1

Query: 163 VRIDPCVNSRL-CHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPFDALYNADAC 339
           V I+ C  ++  C LK+      S DF      T +KT + G   G E+PF  L N DAC
Sbjct: 34  VAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVKTVVHGKVLGIEMPF-PLANPDAC 92

Query: 340 TLT--SCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNEXNESXMC 477
             +   CP E  ++     +L + +  P  +   KW+L ++     +C
Sbjct: 93  VDSGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQDGADIIC 140


>AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA
           protein.
          Length = 148

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
 Frame = +1

Query: 163 VRIDPCVNSRL-CHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAEIPFDALYNADAC 339
           V I+ C  ++  C LK+      S DF      T +KT + G   G E+PF  L N DAC
Sbjct: 34  VAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVKTVVHGKVLGIEMPF-PLANPDAC 92

Query: 340 TLT--SCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNEXNESXMC 477
             +   CP E  ++     +L + +  P  +   KW+L ++     +C
Sbjct: 93  VDSGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQDGADIIC 140


>AY084159-1|AAL89897.1|  159|Drosophila melanogaster RE36503p
           protein.
          Length = 159

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
 Frame = +1

Query: 124 CREVDASACTVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAE 303
           C +  + A    +V I  C  S+ C LK+   A +     P+    +L + + G+     
Sbjct: 26  CPKSKSKALAAGDVSISNCPKSK-CILKRNTEASIQMKIRPERDFQELTSDIQGIILDVP 84

Query: 304 IPFDALYNADAC---------TLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNE 456
           +PF   Y   AC             CP +AG+  T   S  I    PT + E  W L ++
Sbjct: 85  LPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNSFKILPVYPTVSLEIHWGLGDK 144

Query: 457 XNESXMCCYRTNVRL 501
             ++   C++   ++
Sbjct: 145 HGDA--ACFQIPAKI 157


>AE014297-1792|AAN13595.1|  159|Drosophila melanogaster CG3153-PB,
           isoform B protein.
          Length = 159

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
 Frame = +1

Query: 124 CREVDASACTVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAE 303
           C +  + A    +V I  C  S+ C LK+   A +     P+    +L + + G+     
Sbjct: 26  CPKSKSKALAAGDVSISNCPKSK-CILKRNTEASIQMKIRPERDFQELTSDIQGIILDVP 84

Query: 304 IPFDALYNADAC---------TLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNE 456
           +PF   Y   AC             CP +AG+  T   S  I    PT + E  W L ++
Sbjct: 85  LPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNSFKILPVYPTVSLEIHWGLGDK 144

Query: 457 XNESXMCCYRTNVRL 501
             ++   C++   ++
Sbjct: 145 HGDA--ACFQIPAKI 157


>AE014297-1791|AAF55013.1|  159|Drosophila melanogaster CG3153-PA,
           isoform A protein.
          Length = 159

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
 Frame = +1

Query: 124 CREVDASACTVNEVRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKNGAE 303
           C +  + A    +V I  C  S+ C LK+   A +     P+    +L + + G+     
Sbjct: 26  CPKSKSKALAAGDVSISNCPKSK-CILKRNTEASIQMKIRPERDFQELTSDIQGIILDVP 84

Query: 304 IPFDALYNADAC---------TLTSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNE 456
           +PF   Y   AC             CP +AG+  T   S  I    PT + E  W L ++
Sbjct: 85  LPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNSFKILPVYPTVSLEIHWGLGDK 144

Query: 457 XNESXMCCYRTNVRL 501
             ++   C++   ++
Sbjct: 145 HGDA--ACFQIPAKI 157


>AY075563-1|AAL68370.1|  134|Drosophila melanogaster RH68460p
           protein.
          Length = 134

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           +V  + C +    +C++++VR+ PC  +     CH+++     +SFDFTP F    L   
Sbjct: 23  IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVAS 81

Query: 277 LFGLKN-GAEIPFDALYNADAC 339
           L   K+   E+P   + + +AC
Sbjct: 82  LGWAKSENVELPLLTM-DQEAC 102


>AE014297-4658|AAN14257.1|  130|Drosophila melanogaster CG11315-PB,
           isoform B protein.
          Length = 130

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
 Frame = +1

Query: 106 VVTTRLCREVDASACTVNEVRIDPCVNSRL---CHLKKGKNAKVSFDFTPQFSTTKLKTG 276
           +V  + C +    +C++++VR+ PC  +     CH+++     +SFDFTP F    L   
Sbjct: 23  IVNFQTCED-SVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVAS 81

Query: 277 LFGLKN-GAEIPFDALYNADAC 339
           L   K+   E+P   + + +AC
Sbjct: 82  LGWAKSENVELPLLTM-DQEAC 102


>AE014297-1082|AAF54489.1|  165|Drosophila melanogaster CG3934-PA
           protein.
          Length = 165

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
 Frame = +1

Query: 163 VRIDPCVNSRLCHLKKGKNAKVSFDFTPQFSTTKLKTGLFGLKN-GAEIPFD-ALYNADA 336
           V+ID C ++  C L KG  AK+   F    +T K  +    L + G  IP+D      + 
Sbjct: 40  VQIDDC-DALPCDLWKGTEAKIDIQFVATRNTMKKLSAEVHLTSLGVTIPYDLEASRGNV 98

Query: 337 CTL----TSCPTEAGKTQTLXFSLHIGKKLPTGNFEFKWKLWNEXNES-XMCCYRTNVRL 501
           C+       CP +AG+  T    L +    P      + +L +  +E+  + C+  + R+
Sbjct: 99  CSNLLHGAYCPLDAGEDVTYQLLLPVTTNQPEVPTRLEVRLLDSDDENRVVSCFLADTRV 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,302,894
Number of Sequences: 53049
Number of extensions: 534946
Number of successful extensions: 1448
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)