Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B15
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0900 + 6926600-6927202                                           29   4.3  
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486...    28   7.5  
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569           27   9.9  
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28...    27   9.9  
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332...    27   9.9  

>06_01_0900 + 6926600-6927202
          Length = 200

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 550 WIRVGRGGGERSRFLRPG 497
           W RVG GGGER R+ R G
Sbjct: 52  WHRVGGGGGERRRWWRRG 69


>04_01_0097 -
           998766-999383,999479-999861,1000021-1000398,
           1000486-1000711,1000799-1001323,1003032-1003164,
           1004353-1004435,1004645-1005349,1005483-1005556,
           1006290-1006392,1006485-1006727
          Length = 1156

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 354 SPNKSPLKDRRDADREKIX-DRSPTGEKKKSVLPLSN 461
           S  +  ++ R ++ R+K+  D+S  GEK+K  LP S+
Sbjct: 339 SSKQKQVQSRNNSRRQKLEGDKSEVGEKRKRALPSSS 375


>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
          Length = 134

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 540 TRIHIGRLTLNVTRDHIHEIFSDI 611
           T++HI  L   VT D + E+FS+I
Sbjct: 26  TKLHISNLDPGVTVDDVQELFSEI 49


>05_01_0041 +
           281427-281549,281671-281730,281822-281868,282013-282089,
           285368-285440,286193-286281,286665-286711,286805-286885,
           287011-287179,287381-287600,287679-287744,288194-288310,
           288591-288628,288935-289032
          Length = 434

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 540 TRIHIGRLTLNVTRDHIHEIFSD 608
           T +H+  L+ NV  DH+ EIF +
Sbjct: 136 TVLHVDHLSRNVNEDHLKEIFEN 158


>01_07_0305 -
           42631214-42631330,42631423-42631527,42633208-42633216,
           42635198-42636142,42636349-42636450,42637210-42637302
          Length = 456

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 562 SRPMWIRVGRGGGER 518
           + P W+R+GRGGG R
Sbjct: 319 AHPPWLRMGRGGGAR 333


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,542,486
Number of Sequences: 37544
Number of extensions: 169357
Number of successful extensions: 568
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)