Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B14
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 111 TKWRIVNIFHPPSRKPSLRTRRAPTPDRKQKQQT 212
           TK++I+N  +   +   +     PTP+ +  Q T
Sbjct: 374 TKYQILNAINAALKSDEIPPEPVPTPEPQPTQTT 407


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 290 LKYIQRSN*IRVLMTQS---LYSFGVAEKCLLFLLSV 189
           + +I++   I+  + QS   +Y F    KCLLF +SV
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSV 314


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 290 LKYIQRSN*IRVLMTQS---LYSFGVAEKCLLFLLSV 189
           + +I++   I+  + QS   +Y F    KCLLF +SV
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSV 314


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 290 LKYIQRSN*IRVLMTQS---LYSFGVAEKCLLFLLSV 189
           + +I++   I+  + QS   +Y F    KCLLF +SV
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSV 314


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 290 LKYIQRSN*IRVLMTQS---LYSFGVAEKCLLFLLSV 189
           + +I++   I+  + QS   +Y F    KCLLF +SV
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSV 314


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 254 LMTQSLYSFGVAEKCLLFLLSV 189
           L    LYSF    K L+F++S+
Sbjct: 67  LFDGQLYSFNTFAKLLIFVVSL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,425
Number of Sequences: 336
Number of extensions: 2052
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)