Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B11
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.13 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.92 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.9  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.6  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -2

Query: 420 LHVITRHRVTRQVQVAVSYCFQYXQTFPPTSALQQTVLRL*ETQHPSVS--LHRGVFPLQ 247
           L ++T   V  + Q  V  C++Y   F   S  ++ +LRL +  + +++       F + 
Sbjct: 273 LLIMTCSGVHSESQKLVGVCYEYQDRFSDESKKRRELLRLAQQVNANIAQITAANFFDIS 332

Query: 246 RETFL 232
           R TFL
Sbjct: 333 RSTFL 337


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 373 RHLDLPGNPVTCYHMKTLL 429
           RHL L GNP+T     +LL
Sbjct: 516 RHLSLEGNPITTLSNTSLL 534


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 304 PXGNSAPKRLPPSRSFS 254
           P G   PK LPP + FS
Sbjct: 206 PSGGFLPKWLPPLQGFS 222


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 13  DDCREN*LXGNNPKSTLRTS*KIHSCKL 96
           DD  +      NP++TL T   IH  KL
Sbjct: 271 DDAHKTHHLDKNPENTLGTMLSIHPSKL 298


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 293 LSTQASPSIAEFFPCNARHSFDNKVETFRFNFGDYSWDAARV 168
           L  +  PS+  F PCN   ++ ++ +    ++   S D A V
Sbjct: 52  LDLEPLPSLFPFSPCNNTANYKSEAQNQPSSYKQPSSDMADV 93


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 245 RCKGKTPRWR 274
           RC+GK  +WR
Sbjct: 10  RCEGKDSKWR 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,313
Number of Sequences: 336
Number of extensions: 2350
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)