Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_B11
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0) 118 3e-27
SB_43199| Best HMM Match : Mab-21 (HMM E-Value=5.7e-12) 71 1e-12
SB_24909| Best HMM Match : Mab-21 (HMM E-Value=3.4e-06) 61 6e-10
SB_43177| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) 58 5e-09
SB_9403| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 47 1e-05
SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069) 44 8e-05
SB_43686| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_29517| Best HMM Match : Transposase_33 (HMM E-Value=6.9) 42 6e-04
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_18382| Best HMM Match : Kinesin (HMM E-Value=2.3e-14) 29 3.2
SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 29 3.2
SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.5
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 28 5.5
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 28 7.3
SB_23349| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_2854| Best HMM Match : TUDOR (HMM E-Value=0.00033) 28 7.3
SB_6743| Best HMM Match : Mab-21 (HMM E-Value=0.086) 28 7.3
SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15) 27 9.7
SB_31897| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)
Length = 1710
Score = 118 bits (285), Expect = 3e-27
Identities = 65/160 (40%), Positives = 92/160 (57%)
Frame = +1
Query: 34 LXGNNPKSTLRTS*KIHSCKLTPAXQXAPXXXGRGSAAHWPXPGDTLAASQL*SPKLKRK 213
+ G N ST+ + ++ +L PA + + WP P D+ SQ +K +
Sbjct: 1426 MVGANSHSTVLSINDTYTVELIPAFRCG--AIWPQNTCSWPSP-DSYWPSQAAVANIKLR 1482
Query: 214 VSTLLSKECLALQGKNSAMEGDAWVLSFLXAENRLLQGGCRRKCLXILKTIRDRHLDLPG 393
LL+K+ K EGDAWVLSF +E LL GGCRR C+ +LK + D+HL++PG
Sbjct: 1483 GFNLLAKDPYP-SVKPVNTEGDAWVLSFTDSEELLLAGGCRRLCVSMLKALCDKHLNVPG 1541
Query: 394 NPVTCYHMKTLLLYECXKHPREHEWDEAAIGDRINGIFLQ 513
+ + H+K L+LYEC KHPR+ EW + A+ DRINGI LQ
Sbjct: 1542 DCIEYIHLKNLVLYECEKHPRDFEWFDEALFDRINGILLQ 1581
>SB_43199| Best HMM Match : Mab-21 (HMM E-Value=5.7e-12)
Length = 364
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Frame = +1
Query: 283 WVLSFLXAENRLLQGG-------CRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYEC 441
W SF AE +L Q G C ++ L +LK++R+ +++ G P+T YH+KT++ YEC
Sbjct: 238 WRYSFSTAEKKLFQKGFSGDAGTCMKQVLRLLKSLREDYMNYMG-PLTSYHLKTIVFYEC 296
Query: 442 XKHPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVD 570
+ P +WD + + +R L L ++ + PHYF+ +++
Sbjct: 297 ERFPDPSDWDGSKLAERFKSAVLLLQYFIKNKYLPHYFIQNLN 339
>SB_24909| Best HMM Match : Mab-21 (HMM E-Value=3.4e-06)
Length = 702
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = +1
Query: 283 WVLSFLXAENRLLQGGC--RRKCLXILKTIRDRHLDLPGNPVTC-YHMKTLLLYECXKHP 453
W +SF AE L C I KTI L LP V C Y+MKT+ L+ C + P
Sbjct: 514 WRISFSKAEAALFNSMSPPMMHCYRIFKTIYYCELTLP--KVLCSYYMKTIFLWVCERLP 571
Query: 454 REHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVDPLQ 579
E WDE+ + + G+ +L+ L + CPHYF+P + L+
Sbjct: 572 -EDVWDESNLAQVVLGLLDELVHCLVTKSCPHYFIPECNLLE 612
>SB_43177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 283 WVLSFLXAENRLLQGGC--RRKCLXILKTIRDRHLDLPGNPVTC-YHMKTLLLYECXKHP 453
W +SF AE L C I K I L LP V C Y+MKT+ L+ C + P
Sbjct: 350 WRISFSKAEAALFYSMSPPMMHCYRIFKAIFYCELTLP--KVLCSYYMKTIFLWTCERLP 407
Query: 454 REHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLP 561
E WDE+ + + G+ +L+ L + CPHYF+P
Sbjct: 408 EE-VWDESCLAQVVMGLLDELVHCLVTKSCPHYFIP 442
>SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05)
Length = 492
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +1
Query: 274 GDAWVLSFLXAENRLL--QGGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXK 447
G W LSF AE L R C + K I + L P N ++ Y++KT+ L++C +
Sbjct: 368 GLEWRLSFSNAEKTLFAHMTELMRHCFCVFKGIYYQELTTP-NVLSSYYLKTIFLWKCER 426
Query: 448 HPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVDPLQGQVAD 594
P + W E + I G+ L+ L + CPHYF+P + L+ D
Sbjct: 427 MPM-NVWVERNVAQVIMGLLDDLLHCLVNKHCPHYFMPTCNLLENAHGD 474
>SB_9403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Frame = +1
Query: 193 SPKLKRKVSTLLSKECLALQGKNSAMEGDAWVLSFLXAENRLL--QGG-CRRKCLXILKT 363
S KLKRK+ T KNS D W + FL + L+ +G + KCL I+K
Sbjct: 411 SEKLKRKIVTQGIHLAALPPSKNS----DLWQIKFLNGQRALIHHEGNEAKAKCLRIVKV 466
Query: 364 IRDRHLDLPGNPVTCYHMKTLLLYECXKHPREHEWDEAAIGDRINGIFLQLISSLQCRRC 543
+ + L P + +++ +L++ K+ + +W EA + R + L ++ C
Sbjct: 467 LCEVDLSYP-KAIRPQYLENILMWASRKYWSDSDWTEANLPARFLDLMAGLHKCMKNGDC 525
Query: 544 PHYFLPHVDPL 576
+FLP V+ L
Sbjct: 526 HDFFLPSVNLL 536
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +1
Query: 325 GGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXKHPREHEWDEAAIGDRINGI 504
GGCR L I+KT+ L G ++ YH+KT L W +GDR
Sbjct: 224 GGCRHILLRIVKTMVRNESALKGE-LSSYHLKTAFLRLIKTKDSPGYWHRDLLGDRFLEF 282
Query: 505 FLQLISSLQCRRCPHYFLPHVDPLQ 579
L ++L+ + PHY++P V+ L+
Sbjct: 283 ITILHNALRDKSLPHYWIPSVNLLE 307
>SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 283 WVLSFLXAENRLL--QGGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXKHPR 456
W ++FL RLL + GC+ KC +++ + + L + H++ +LL+ K P
Sbjct: 230 WQIAFLQPIRRLLADKTGCKHKCAMVMRILLENSSTLQ-EVIAGNHLENVLLHLFKKFPV 288
Query: 457 EHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVD 570
WDE G R I +L ++ R +F+P ++
Sbjct: 289 ASFWDEDRFGQRFLDIVNELDKCVRDRHLADFFIPDLN 326
>SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069)
Length = 639
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +1
Query: 229 SKECLALQGKNSAMEGDAWVLSFLXAENRLLQG--GCRRKCLXILKTIRDRHLDLPGNPV 402
S+E + M+ W +SF AENRL Q +R L +LK I+ + +
Sbjct: 239 SRESKEGPDNHQVMDEFEWRMSFSLAENRLAQSLTPVQRHTLVLLKIIKKVYFP---EVI 295
Query: 403 TCYHMKTLLLYECXKHPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVDPLQG 582
+ Y +K LL +EC ++ E W G + + +L + PHY +P + L G
Sbjct: 296 SSYFLKNLLFWEC-ENNGESFWKGTTSGKCLLRMLDRLQDCFEKGNLPHYIIPESNLLAG 354
Query: 583 Q 585
+
Sbjct: 355 E 355
>SB_43686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 280 AWVLSFLXAENRLLQG----GCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXK 447
AW LSF E L+ GCR L IL IRD +L ++ H+ +L +E
Sbjct: 221 AWRLSFYVGEKNKLRAIGTEGCRIPLLRILTEIRDNEDEL--KLLSTVHLMHILFHESDA 278
Query: 448 HPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVD 570
P +EW I R G+ ++ +L+ HYF+ D
Sbjct: 279 IPDSNEWTTEKISVRFFGLLDRMKKALKDGELLHYFMQPPD 319
>SB_29517| Best HMM Match : Transposase_33 (HMM E-Value=6.9)
Length = 201
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 328 GCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLL-YECXKHPREHEWDEAAIGDRINGI 504
GCR + + I K+IR + D+P + ++ YH+KT+ Y K + +W + + DR G+
Sbjct: 79 GCRHEVIRIAKSIRLK--DIPLHHLSSYHIKTVFFHYNFGKE--DLDWSKDKVVDRFIGL 134
Query: 505 FLQLISSLQCRRCPHYFLPHVD 570
L + + P Y++P ++
Sbjct: 135 LQLLRDYVSKQNLPSYYIPRLN 156
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 41.1 bits (92), Expect = 7e-04
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 136 GSAAHWPXPGDTLAASQL*SPKL-KRKVSTLLSKECLALQGKNSAMEGDAWVLSFLXAEN 312
G H P D L + P + + + S + + E A + + M+ W LSF AEN
Sbjct: 72 GRGKHLTQPEDAL--QYIKHPGITEAQSSAIAATEGGARKEDGNQMDEREWRLSFSVAEN 129
Query: 313 RLLQG--GCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXKHPREHEWDEAAIG 486
L Q +R + ++K ++ +L + + YH+K LL +EC ++ E W E+
Sbjct: 130 ILGQNISPLQRYLIVLMKMLKKHYLP---DVICSYHLKNLLFWEC-ENMEEIFWRESTSA 185
Query: 487 DRINGIFLQLISSLQCRRCPHYFLP 561
+ + +L L+ P Y +P
Sbjct: 186 KCLLHLLDRLEECLKQGHLPQYMMP 210
>SB_18382| Best HMM Match : Kinesin (HMM E-Value=2.3e-14)
Length = 278
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 495 DPVADGGLVPLVLPRVFXALVQQQRLHVITRHRVTRQVQVAVSYCFQYXQ 346
D A GL+PL++ VF + Q R T T QV V C Y +
Sbjct: 87 DKTAKAGLIPLLINGVFMKVRDQAREQNRTHLTATSSSQVVVQCCEFYNE 136
>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
Length = 1103
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 561 RQEVVGAAAALERGYQLQEDPVDPVADGGLVPL--VLPRV 448
R +G ++E +Q Q P+DP DGG + V PRV
Sbjct: 430 RDSHLGTLTSIESSFQQQISPLDPQRDGGTLDTLGVRPRV 469
>SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = -3
Query: 371 SLIVFSMXRHFRRHPPC--SRRFSAXRKLSTQASPSIAEFFPCNARHSFDNKVETFRFNF 198
SL+ + ++R PP S+ R + S A F C+ + +DNKV +
Sbjct: 251 SLVKNTNISTWKRDPPSRPSQLRQGVRGVQAVPKRSTAGMF-CSKKRYYDNKVVALKATN 309
Query: 197 GDYSWDAARVSPGXGQCAAXPRP 129
WDA R P G +P
Sbjct: 310 IKRWWDAERSVPDSGDSGRAVQP 332
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 358 KTIRDRHLD--LPGNPV-TCYHMKTLLLYECXKHPREHEWDEAAIGDRINGIFLQ---LI 519
K IR RH D + N TCY L E +H R H D+ + F+Q L
Sbjct: 375 KHIRRRHSDPNVDQNTCGTCYQTFENTL-ELMQHRRSHTGDKGFQCELCGQGFVQRSGLN 433
Query: 520 SSLQCRRCPH 549
L+CRRCP+
Sbjct: 434 KHLRCRRCPN 443
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 310 SPPXGNSAPKRLPPSRSFSLATRDIPLIIKSK 215
S P +++ K PS+ FS ATRDI ++++K
Sbjct: 118 SLPSQSTSLKSSNPSKKFSHATRDIDKVVENK 149
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 349 SDISADIRLAADGSPPXGNSAPKRLPPSRSFSLATRDIPLIIKSK 215
+D SA+ R+ AP LP SLA R++PL++ S+
Sbjct: 656 NDQSAEPRIKKSPVASRPGQAPVNLPHMDPVSLAGRNVPLVLMSE 700
>SB_23349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 328 GCRRKCLXILKTI-RDRHLDLPGNPVTCYHMKTLLL 432
GC+++ L I+KTI + L GN +T YH+K L
Sbjct: 781 GCKKEVLKIMKTIVSTDNSQLRGN-LTSYHLKNAFL 815
>SB_2854| Best HMM Match : TUDOR (HMM E-Value=0.00033)
Length = 359
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 NNPK-STLRTS*KIHSCKLTPAXQXAPXXXGRGSAAHWP-XPGDTLAAS 183
++PK S R HS +T A GRG+ A W PG LAAS
Sbjct: 142 HSPKTSCYRPIKTYHSLDVTSQRAMAGRGRGRGALARWTISPGQPLAAS 190
>SB_6743| Best HMM Match : Mab-21 (HMM E-Value=0.086)
Length = 412
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 283 WVLSFLXAENRLLQ------GGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECX 444
W SF E L+ GCRR+ + I+KTI + L ++ YH+KT L +
Sbjct: 278 WRQSFSLKEKHLMDKLDKDDNGCRREMVRIVKTIVKKDPTLA--QLSSYHIKTAFL-QYN 334
Query: 445 KHPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVDPL 576
+ +W+ + +R L ++ + +YF+ ++ L
Sbjct: 335 FSDVKLDWEGKKLAERFLHFLEFLRDRVKDKTLNNYFITDLNLL 378
>SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15)
Length = 875
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 283 WVLSFLXAENRLLQG--GCRRKCLXILKTIRD--RHLDLPGNP-VTCYHMKTLLLY 435
W +SF AE L++ + ILK + + + L GN VT YH+K+LLL+
Sbjct: 655 WRISFSLAEATLIRSLNEVHKNSFRILKALINSAKEKRLIGNKWVTSYHLKSLLLH 710
>SB_31897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 132 PRXRRTLAPSRRYPGRIPTIIAEVK 206
P +AP RR+PGR P IA V+
Sbjct: 30 PDSHTVVAPVRRFPGRGPVPIAAVR 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,278
Number of Sequences: 59808
Number of extensions: 337797
Number of successful extensions: 885
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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