Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B11
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   3.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.1  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = -3

Query: 347 RHFRRHPPCSRRFSAXRKLSTQASPSI----AEFFPCNARHSFDN 225
           RH RR PP  RR    R+  T A   +     E++P     +FD+
Sbjct: 332 RHRRRRPPPRRRHD-RRRYPTNAGHKVMNAPKEYYPVGYDKNFDD 375


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 630 SLQTCLAAFSSAVGDLPLKRVHVRQEVVGAAAA 532
           +  +C A    AVG+LP++RV    E  G  AA
Sbjct: 60  AFSSCKAVAVVAVGELPIQRVWC-SEAQGLVAA 91


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 406 TSPGYPASPSGGLLLFSVXSDISADIRLAADGSPP 302
           +S G PA+P    ++FS    ++     AA  SPP
Sbjct: 274 SSVGDPANPQQPSVIFSPVPRLAGSSPAAAPPSPP 308


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 611 PRSPAPSATCP*RGST 564
           P +PAP A C   GST
Sbjct: 183 PNAPAPKAPCQPAGST 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,382
Number of Sequences: 2352
Number of extensions: 10759
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)