Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B11
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical pr...   150   9e-37
U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein ...   150   9e-37
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    29   2.1  

>Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical
           protein F35G12.6 protein.
          Length = 364

 Score =  150 bits (363), Expect = 9e-37
 Identities = 78/154 (50%), Positives = 98/154 (63%), Gaps = 5/154 (3%)
 Frame = +1

Query: 139 SAAHWPXPGDTLAASQL*SPKLKRKVSTLLSKECLALQGKN-----SAMEGDAWVLSFLX 303
           SA+HWP  G     + L + + K +   L S+E    Q  N     S+ME DAW +    
Sbjct: 184 SASHWPIAGLPWPNAAL-ANQTKAEGFDLTSRETAITQQNNPNKQASSMEADAWAMKMHG 242

Query: 304 AENRLLQGGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXKHPREHEWDEAAI 483
           AEN LL GG RRK L ILK +RD H+D PG PVT Y +KTL+LYEC KH  E+EW++  I
Sbjct: 243 AENMLLTGG-RRKTLSILKCLRDAHMDFPGTPVTNYILKTLVLYECEKHCSEYEWEDPNI 301

Query: 484 GDRINGIFLQLISSLQCRRCPHYFLPHVDPLQGQ 585
           GDR+ GI LQL+S LQCRRC HYFLP +D L+ +
Sbjct: 302 GDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSK 335


>U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein
           protein.
          Length = 364

 Score =  150 bits (363), Expect = 9e-37
 Identities = 78/154 (50%), Positives = 98/154 (63%), Gaps = 5/154 (3%)
 Frame = +1

Query: 139 SAAHWPXPGDTLAASQL*SPKLKRKVSTLLSKECLALQGKN-----SAMEGDAWVLSFLX 303
           SA+HWP  G     + L + + K +   L S+E    Q  N     S+ME DAW +    
Sbjct: 184 SASHWPIAGLPWPNAAL-ANQTKAEGFDLTSRETAITQQNNPNKQASSMEADAWAMKMHG 242

Query: 304 AENRLLQGGCRRKCLXILKTIRDRHLDLPGNPVTCYHMKTLLLYECXKHPREHEWDEAAI 483
           AEN LL GG RRK L ILK +RD H+D PG PVT Y +KTL+LYEC KH  E+EW++  I
Sbjct: 243 AENMLLTGG-RRKTLSILKCLRDAHMDFPGTPVTNYILKTLVLYECEKHCSEYEWEDPNI 301

Query: 484 GDRINGIFLQLISSLQCRRCPHYFLPHVDPLQGQ 585
           GDR+ GI LQL+S LQCRRC HYFLP +D L+ +
Sbjct: 302 GDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSK 335


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 511 QLISSLQCRRCPHYFLPHVDPLQGQVADGAGE 606
           QL+S ++C + P+Y  PHV      + DG  E
Sbjct: 855 QLLSGMECNKIPYYLRPHV--YSAAINDGTQE 884


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,350,041
Number of Sequences: 27780
Number of extensions: 244925
Number of successful extensions: 650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)