Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B10
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   3.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   3.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.6  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 96  KVAEHLVKNRLEWF 55
           KV  HL+KN+  W+
Sbjct: 84  KVIRHLIKNKPSWW 97


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 96  KVAEHLVKNRLEWF 55
           KV  HL+KN+  W+
Sbjct: 85  KVLHHLIKNKPNWW 98


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 368 QSLMRSLVQLTYQFVPQILLLXILG 294
           ++L+R    L   F PQ+LL  +LG
Sbjct: 86  KTLVRVAKSLNQVFAPQLLLWVLLG 110


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 390 TGSPTRRTKPNEKPSAVDLSICTP 319
           T SPT+       P+A   S+ TP
Sbjct: 198 TTSPTKVKASKASPAAAPRSVATP 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,627
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)