Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B10
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659...    30   1.8  
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946...    29   4.1  
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177...    28   5.4  
07_03_0594 - 19833967-19834557                                         28   7.1  
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320...    27   9.4  

>02_02_0078 +
           6587491-6588021,6588160-6589151,6592430-6592607,
           6592635-6592794,6592992-6593158,6593246-6593869
          Length = 883

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -2

Query: 138 VASYRPIALSSVLTKVAEHLVKNRLEWF 55
           ++ +RPI+L +VL K+A  ++ NRL+ F
Sbjct: 184 LSKFRPISLCNVLYKIASKVLANRLKLF 211


>01_01_1190 +
           9463973-9465732,9466210-9466440,9467664-9467793,
           9468723-9468888,9469528-9469859,9470284-9470513,
           9471535-9471613,9471689-9471865
          Length = 1034

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 351 PSAVDLSICTPDLASXHSWYTSSSTFGS 268
           P  VD+  C+P LAS  SW +SS  FG+
Sbjct: 104 PGLVDVEGCSPTLAS--SWSSSSFVFGA 129


>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
            1778770-1778900,1779530-1779788,1779823-1780098,
            1780100-1781352
          Length = 1344

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 174  LVCI*EPCRINDVASYRPIALSSVLTKVAEHLVKNRLE 61
            +V I +P + N V  YRPI+L +   K+   ++  RL+
Sbjct: 973  IVLIQKPGKENTVDGYRPISLQNCSVKILSKVLATRLQ 1010


>07_03_0594 - 19833967-19834557
          Length = 196

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 321 PDLASXHSWYTSSSTFGSDH 262
           PDLA    WY  SS  G+DH
Sbjct: 49  PDLAEADVWYAPSSEGGADH 68


>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
            17532062-17533525
          Length = 1626

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 141  DVASYRPIALSSVLTKVAEHLVKNRL 64
            D+  YRPI+L +V+ KV    + NRL
Sbjct: 963  DLKDYRPISLCNVVYKVVSKCLVNRL 988


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,374,048
Number of Sequences: 37544
Number of extensions: 222142
Number of successful extensions: 417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)